STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_1995Hypothetical protein; Uncharacterized protein (430 aa)    
Predicted Functional Partners:
DR97_1994
annotation not available
 
     0.900
DR97_985
Hypothetical protein; Uncharacterized protein
  
     0.692
DR97_1250
Hypothetical protein; Uncharacterized protein
  
     0.682
DR97_3236
Hypothetical protein; Uncharacterized protein
  
     0.651
DR97_294
Hypothetical protein; Biotin ligase C terminal domain protein
  
     0.629
DR97_2019
Hypothetical protein; Uncharacterized protein
  
     0.617
DR97_1937
Hypothetical protein; Uncharacterized protein
  
     0.615
DR97_6371
Conserved hypothetical protein
  
     0.586
DR97_3907
annotation not available
  
     0.565
DR97_5362
Conserved hypothetical protein
  
     0.562
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.