Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_16 | DR97_17 | DR97_16 | DR97_17 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.603 |
DR97_16 | YedI | DR97_16 | DR97_20 | annotation not available | Uncharacterized protein; Inner membrane protein YedI | 0.407 |
DR97_16 | str | DR97_16 | DR97_18 | annotation not available | annotation not available | 0.601 |
DR97_17 | DR97_16 | DR97_17 | DR97_16 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.603 |
DR97_17 | YedI | DR97_17 | DR97_20 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | Uncharacterized protein; Inner membrane protein YedI | 0.547 |
DR97_17 | str | DR97_17 | DR97_18 | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | annotation not available | 0.850 |
DR97_2059 | YedI | DR97_2059 | DR97_20 | annotation not available | Uncharacterized protein; Inner membrane protein YedI | 0.464 |
YedI | DR97_16 | DR97_20 | DR97_16 | Uncharacterized protein; Inner membrane protein YedI | annotation not available | 0.407 |
YedI | DR97_17 | DR97_20 | DR97_17 | Uncharacterized protein; Inner membrane protein YedI | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.547 |
YedI | DR97_2059 | DR97_20 | DR97_2059 | Uncharacterized protein; Inner membrane protein YedI | annotation not available | 0.464 |
YedI | str | DR97_20 | DR97_18 | Uncharacterized protein; Inner membrane protein YedI | annotation not available | 0.549 |
str | DR97_16 | DR97_18 | DR97_16 | annotation not available | annotation not available | 0.601 |
str | DR97_17 | DR97_18 | DR97_17 | annotation not available | Bacterial regulatory helix-turn-helix , lysr family protein; Belongs to the LysR transcriptional regulatory family | 0.850 |
str | YedI | DR97_18 | DR97_20 | annotation not available | Uncharacterized protein; Inner membrane protein YedI | 0.549 |