Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2040 | DR97_2041 | DR97_2040 | DR97_2041 | annotation not available | annotation not available | 0.898 |
| DR97_2040 | DR97_2043 | DR97_2040 | DR97_2043 | annotation not available | annotation not available | 0.487 |
| DR97_2040 | mrcB | DR97_2040 | DR97_2042 | annotation not available | Penicillin-binding protein 1b; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.773 |
| DR97_2041 | DR97_2040 | DR97_2041 | DR97_2040 | annotation not available | annotation not available | 0.898 |
| DR97_2041 | DR97_2043 | DR97_2041 | DR97_2043 | annotation not available | annotation not available | 0.599 |
| DR97_2041 | mrcB | DR97_2041 | DR97_2042 | annotation not available | Penicillin-binding protein 1b; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.841 |
| DR97_2043 | DR97_2040 | DR97_2043 | DR97_2040 | annotation not available | annotation not available | 0.487 |
| DR97_2043 | DR97_2041 | DR97_2043 | DR97_2041 | annotation not available | annotation not available | 0.599 |
| DR97_2043 | mrcB | DR97_2043 | DR97_2042 | annotation not available | Penicillin-binding protein 1b; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.720 |
| dacC | ftsI | DR97_3868 | DR97_1596 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | 0.790 |
| dacC | holA | DR97_3868 | DR97_3876 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | holA: DNA polymerase III, delta subunit | 0.469 |
| dacC | mrcA | DR97_3868 | DR97_2400 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Penicillin-binding , 1a family protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.983 |
| dacC | mrcB | DR97_3868 | DR97_2042 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Penicillin-binding protein 1b; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.748 |
| dacC | mrdA | DR97_3868 | DR97_3864 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall | 0.994 |
| dacC | mreC | DR97_3868 | DR97_1659 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Rod shape-determining protein mrec; Involved in formation and maintenance of cell shape | 0.591 |
| dacC | pbpC | DR97_3868 | DR97_6161 | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | 0.790 |
| ftsI | dacC | DR97_1596 | DR97_3868 | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | Serine-type d-ala-d-ala carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family | 0.790 |
| ftsI | mrcA | DR97_1596 | DR97_2400 | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | Penicillin-binding , 1a family protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.838 |
| ftsI | mrcB | DR97_1596 | DR97_2042 | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | Penicillin-binding protein 1b; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits) | 0.824 |
| ftsI | mrdA | DR97_1596 | DR97_3864 | Cell division protein ftsi (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum (By similarity). Binds penicillin | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall | 0.902 |
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