Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FecR | PhuS | DR97_3966 | DR97_2051 | annotation not available | annotation not available | 0.721 |
FecR | hasR | DR97_3966 | DR97_4513 | annotation not available | annotation not available | 0.574 |
FecR | phuR | DR97_3966 | DR97_2052 | annotation not available | Uncharacterized protein; tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein | 0.610 |
FecR | phuT | DR97_3966 | DR97_2050 | annotation not available | annotation not available | 0.604 |
FecR | pigA | DR97_3966 | DR97_1447 | annotation not available | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.791 |
PhuS | FecR | DR97_2051 | DR97_3966 | annotation not available | annotation not available | 0.721 |
PhuS | PhuU | DR97_2051 | DR97_2049 | annotation not available | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | 0.981 |
PhuS | PhuW | DR97_2051 | DR97_2047 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.774 |
PhuS | bphP | DR97_2051 | DR97_3754 | annotation not available | Putative bacteriophytochrome; Photoreceptor which exists in two forms that are reversibly interconvertible by light: the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region | 0.851 |
PhuS | hasA | DR97_2051 | DR97_4514 | annotation not available | annotation not available | 0.854 |
PhuS | hasR | DR97_2051 | DR97_4513 | annotation not available | annotation not available | 0.889 |
PhuS | hmuV | DR97_2051 | DR97_2048 | annotation not available | Iron complex transport system atp-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system | 0.958 |
PhuS | phuR | DR97_2051 | DR97_2052 | annotation not available | Uncharacterized protein; tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein | 0.977 |
PhuS | phuT | DR97_2051 | DR97_2050 | annotation not available | annotation not available | 0.993 |
PhuS | pigA | DR97_2051 | DR97_1447 | annotation not available | Heme oxygenase (biliverdin-ix-beta and delta-forming); Involved in heme degradation. Catalyzes the degradation of heme to biliverdin, with the release of iron. Forms biliverdin delta (70%) and beta (30%) | 0.936 |
PhuU | PhuS | DR97_2049 | DR97_2051 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | annotation not available | 0.981 |
PhuU | PhuW | DR97_2049 | DR97_2047 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | Hypothetical protein; Uncharacterized protein | 0.989 |
PhuU | hmuV | DR97_2049 | DR97_2048 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | Iron complex transport system atp-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system | 0.999 |
PhuU | phuR | DR97_2049 | DR97_2052 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | Uncharacterized protein; tonB-hemlactrns: TonB-dependent hemoglobin/transferrin/lactoferrin receptor family protein | 0.912 |
PhuU | phuT | DR97_2049 | DR97_2050 | Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily | annotation not available | 0.994 |
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