STRINGSTRING
alaC protein (Pseudomonas aeruginosa) - STRING interaction network
"alaC" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
alaCannotation not available (411 aa)    
Predicted Functional Partners:
gltB
annotation not available (1481 aa)
   
 
  0.760
hom
annotation not available (434 aa)
   
 
  0.684
hisQ1
Histidine transport system permease protein HisQ; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein (229 aa)
           
  0.623
DR97_2058
Uncharacterized protein; phzF_- phenazine biosynthesis , PhzF family protein (284 aa)
   
        0.615
sdaA3
Sda_mono- L-serine ammonia-lyase (458 aa)
     
   
  0.590
sucA
2oxo_dh_E1- oxoglutarate dehydrogenase (succinyl-transferring), E1 component (943 aa)
     
   
  0.489
sthA
Soluble pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family (464 aa)
     
   
  0.487
vanA
annotation not available (351 aa)
           
  0.459
ypfJ
annotation not available (297 aa)
   
        0.456
thrC
thrC- threonine synthase (469 aa)
   
 
  0.451
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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