node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2660 | YfjF | DR97_2660 | DR97_2110 | annotation not available | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.604 |
PerM | YfjF | DR97_940 | DR97_2110 | Hypothetical protein; Transport of quorum-sensing signal protein | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.683 |
YfjF | DR97_2660 | DR97_2110 | DR97_2660 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | annotation not available | 0.604 |
YfjF | PerM | DR97_2110 | DR97_940 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Hypothetical protein; Transport of quorum-sensing signal protein | 0.683 |
YfjF | guaA | DR97_2110 | DR97_4101 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Bifunctional gmp synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP | 0.459 |
YfjF | ratA | DR97_2110 | DR97_2111 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Polyketide cyclase / dehydrase and lipid transport family protein; Toxic component of a type II toxin-antitoxin (TA) system. Binds to 50S ribosomal subunits, preventing them from associating with 30S subunits to form 70S ribosomes. Its antitoxin is unknown (By similarity) | 0.992 |
YfjF | rnfB | DR97_2110 | DR97_4434 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Na+-translocating ferredoxin:nad+ oxidoreductase subunit b; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.700 |
YfjF | rnfC | DR97_2110 | DR97_4433 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Na+-translocating ferredoxin:nad+ oxidoreductase subunit c; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.455 |
YfjF | rnfD | DR97_2110 | DR97_4432 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Na+-translocating ferredoxin:nad+ oxidoreductase subunit d; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.406 |
YfjF | rnfE | DR97_2110 | DR97_4430 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Na+-translocating ferredoxin:nad+ oxidoreductase subunit e; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.409 |
YfjF | rnfG | DR97_2110 | DR97_4431 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Na+-translocating ferredoxin:nad+ oxidoreductase subunit g; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.478 |
YfjF | smpB | DR97_2110 | DR97_2112 | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | Ssra-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.620 |
guaA | YfjF | DR97_4101 | DR97_2110 | Bifunctional gmp synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.459 |
guaA | smpB | DR97_4101 | DR97_2112 | Bifunctional gmp synthase/glutamine amidotransferase protein; Catalyzes the synthesis of GMP from XMP | Ssra-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.519 |
ratA | YfjF | DR97_2111 | DR97_2110 | Polyketide cyclase / dehydrase and lipid transport family protein; Toxic component of a type II toxin-antitoxin (TA) system. Binds to 50S ribosomal subunits, preventing them from associating with 30S subunits to form 70S ribosomes. Its antitoxin is unknown (By similarity) | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.992 |
ratA | smpB | DR97_2111 | DR97_2112 | Polyketide cyclase / dehydrase and lipid transport family protein; Toxic component of a type II toxin-antitoxin (TA) system. Binds to 50S ribosomal subunits, preventing them from associating with 30S subunits to form 70S ribosomes. Its antitoxin is unknown (By similarity) | Ssra-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...] | 0.673 |
rnfB | YfjF | DR97_4434 | DR97_2110 | Na+-translocating ferredoxin:nad+ oxidoreductase subunit b; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | Rnfh ubiquitin family protein; Belongs to the UPF0125 (RnfH) family | 0.700 |
rnfB | rnfC | DR97_4434 | DR97_4433 | Na+-translocating ferredoxin:nad+ oxidoreductase subunit b; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | Na+-translocating ferredoxin:nad+ oxidoreductase subunit c; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.999 |
rnfB | rnfD | DR97_4434 | DR97_4432 | Na+-translocating ferredoxin:nad+ oxidoreductase subunit b; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | Na+-translocating ferredoxin:nad+ oxidoreductase subunit d; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.998 |
rnfB | rnfE | DR97_4434 | DR97_4430 | Na+-translocating ferredoxin:nad+ oxidoreductase subunit b; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | Na+-translocating ferredoxin:nad+ oxidoreductase subunit e; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane | 0.993 |