Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_1508 | DR97_2126 | DR97_1508 | DR97_2126 | GGDEF: diguanylate cyclase domain protein | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | 0.748 |
| DR97_1508 | DR97_3252 | DR97_1508 | DR97_3252 | GGDEF: diguanylate cyclase domain protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.501 |
| DR97_1508 | DR97_3759 | DR97_1508 | DR97_3759 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.898 |
| DR97_1508 | bifA | DR97_1508 | DR97_1545 | GGDEF: diguanylate cyclase domain protein | Ggdef domain/eal domain-containing protein; Protein BifA; GGDEF: diguanylate cyclase domain protein | 0.772 |
| DR97_1508 | bvgS | DR97_1508 | DR97_3920 | GGDEF: diguanylate cyclase domain protein | annotation not available | 0.928 |
| DR97_2126 | DR97_1508 | DR97_2126 | DR97_1508 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | GGDEF: diguanylate cyclase domain protein | 0.748 |
| DR97_2126 | DR97_3125 | DR97_2126 | DR97_3125 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | 0.862 |
| DR97_2126 | DR97_3252 | DR97_2126 | DR97_3252 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.783 |
| DR97_2126 | DR97_3759 | DR97_2126 | DR97_3759 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | annotation not available | 0.829 |
| DR97_2126 | DR97_4759 | DR97_2126 | DR97_4759 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.751 |
| DR97_2126 | DR97_5178 | DR97_2126 | DR97_5178 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | GGDEF: diguanylate cyclase domain protein | 0.738 |
| DR97_2126 | DR97_694 | DR97_2126 | DR97_694 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | annotation not available | 0.727 |
| DR97_2126 | DR97_830 | DR97_2126 | DR97_830 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | GGDEF: diguanylate cyclase domain protein | 0.770 |
| DR97_2126 | bifA | DR97_2126 | DR97_1545 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | Ggdef domain/eal domain-containing protein; Protein BifA; GGDEF: diguanylate cyclase domain protein | 0.797 |
| DR97_2126 | bvgS | DR97_2126 | DR97_3920 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | annotation not available | 0.857 |
| DR97_3125 | DR97_2126 | DR97_3125 | DR97_2126 | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | 0.862 |
| DR97_3125 | DR97_3252 | DR97_3125 | DR97_3252 | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | Sensory box ggdef domain-containing protein; GGDEF: diguanylate cyclase domain protein | 0.507 |
| DR97_3125 | DR97_3759 | DR97_3125 | DR97_3759 | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.909 |
| DR97_3125 | DR97_694 | DR97_3125 | DR97_694 | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | annotation not available | 0.456 |
| DR97_3125 | bifA | DR97_3125 | DR97_1545 | Response regulator PleD; GGDEF: diguanylate cyclase domain protein | Ggdef domain/eal domain-containing protein; Protein BifA; GGDEF: diguanylate cyclase domain protein | 0.638 |
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