Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1308 | DR97_4623 | DR97_1308 | DR97_4623 | topB: DNA topoisomerase III family protein | annotation not available | 0.683 |
DR97_1308 | YedA | DR97_1308 | DR97_2128 | topB: DNA topoisomerase III family protein | annotation not available | 0.728 |
DR97_1308 | spoOJ | DR97_1308 | DR97_2941 | topB: DNA topoisomerase III family protein | Parb family transcriptional regulator, chromosome partitioning protein; parB_part: ParB/RepB/Spo0J family partition domain protein; Belongs to the ParB family | 0.766 |
DR97_2125 | DR97_2126 | DR97_2125 | DR97_2126 | annotation not available | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | 0.557 |
DR97_2125 | YedA | DR97_2125 | DR97_2128 | annotation not available | annotation not available | 0.441 |
DR97_2126 | DR97_2125 | DR97_2126 | DR97_2125 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | annotation not available | 0.557 |
DR97_2126 | DR97_2127 | DR97_2126 | DR97_2127 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | Hypothetical protein; Putative secreted protein | 0.573 |
DR97_2126 | YedA | DR97_2126 | DR97_2128 | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | annotation not available | 0.518 |
DR97_2127 | DR97_2126 | DR97_2127 | DR97_2126 | Hypothetical protein; Putative secreted protein | Putative two-component system response regulator; Phosphodiesterase (PDE) that catalyzes the hydrolysis of cyclic diguanylate (c-di-GMP) to GMP Hydrolyzes c-di-GMP to GMP in a two-step reaction, via the linear intermediate 5'-phosphoguanylyl(3'->5')guanosine (pGpG). In vitro, can use pGpG as an alternative substrate and hydrolyze it into GMP . Acts in regulation of motility, synthesis of virulence determinants and biofilm architecture . May act preferentially as a pGpG binding protein | 0.573 |
DR97_2127 | DR97_2129 | DR97_2127 | DR97_2129 | Hypothetical protein; Putative secreted protein | annotation not available | 0.500 |
DR97_2127 | YedA | DR97_2127 | DR97_2128 | Hypothetical protein; Putative secreted protein | annotation not available | 0.738 |
DR97_2129 | DR97_2127 | DR97_2129 | DR97_2127 | annotation not available | Hypothetical protein; Putative secreted protein | 0.500 |
DR97_2129 | YedA | DR97_2129 | DR97_2128 | annotation not available | annotation not available | 0.756 |
DR97_4623 | DR97_1308 | DR97_4623 | DR97_1308 | annotation not available | topB: DNA topoisomerase III family protein | 0.683 |
DR97_4623 | DR97_5572 | DR97_4623 | DR97_5572 | annotation not available | topB: DNA topoisomerase III family protein | 0.683 |
DR97_4623 | YedA | DR97_4623 | DR97_2128 | annotation not available | annotation not available | 0.854 |
DR97_4623 | spoOJ | DR97_4623 | DR97_2941 | annotation not available | Parb family transcriptional regulator, chromosome partitioning protein; parB_part: ParB/RepB/Spo0J family partition domain protein; Belongs to the ParB family | 0.485 |
DR97_5572 | DR97_4623 | DR97_5572 | DR97_4623 | topB: DNA topoisomerase III family protein | annotation not available | 0.683 |
DR97_5572 | YedA | DR97_5572 | DR97_2128 | topB: DNA topoisomerase III family protein | annotation not available | 0.728 |
DR97_5572 | spoOJ | DR97_5572 | DR97_2941 | topB: DNA topoisomerase III family protein | Parb family transcriptional regulator, chromosome partitioning protein; parB_part: ParB/RepB/Spo0J family partition domain protein; Belongs to the ParB family | 0.766 |
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