Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| fdnG | selA | DR97_2159 | DR97_2155 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | L-seryl-trna(ser) seleniumtransferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis | 0.958 |
| fdnG | selB | DR97_2159 | DR97_2154 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | selB: selenocysteine-specific translation elongation factor | 0.976 |
| fdnG | selD | DR97_2159 | DR97_247 | Formate dehydrogenase-o major subunit; formate-DH-alph: formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family | Selenophosphate synthetase; Synthesizes selenophosphate from selenide and ATP | 0.881 |
| murU | selB | DR97_3566 | DR97_2154 | N-acetyl-alpha-d-muramate 1-phosphate uridylyltransferase; Catalyzes the formation of UDP-N-acetylmuramate (UDP-MurNAc), a crucial precursor of the bacterial peptidoglycan cell wall, from UTP and MurNAc-alpha-1P (By similarity). Is involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc . Plays a role in intrinsic resistance to fosfomycin, which targets the de novo synthesis of UDP-MurNAc | selB: selenocysteine-specific translation elongation factor | 0.957 |
| rplD | rpsB | DR97_3649 | DR97_4283 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | 0.999 |
| rplD | rpsC | DR97_3649 | DR97_3654 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | 0.999 |
| rplD | rpsE | DR97_3649 | DR97_3665 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | Small subunit ribosomal protein s5; With S4 and S12 plays an important role in translational accuracy | 0.999 |
| rplD | rpsH | DR97_3649 | DR97_3662 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | Small subunit ribosomal protein s8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | 0.999 |
| rplD | rpsQ | DR97_3649 | DR97_3657 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |
| rplD | selB | DR97_3649 | DR97_2154 | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | selB: selenocysteine-specific translation elongation factor | 0.965 |
| rpsB | rplD | DR97_4283 | DR97_3649 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | 0.999 |
| rpsB | rpsC | DR97_4283 | DR97_3654 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | 0.999 |
| rpsB | rpsE | DR97_4283 | DR97_3665 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | Small subunit ribosomal protein s5; With S4 and S12 plays an important role in translational accuracy | 0.999 |
| rpsB | rpsH | DR97_4283 | DR97_3662 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | Small subunit ribosomal protein s8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | 0.999 |
| rpsB | rpsQ | DR97_4283 | DR97_3657 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | Small subunit ribosomal protein s17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA | 0.999 |
| rpsB | selB | DR97_4283 | DR97_2154 | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | selB: selenocysteine-specific translation elongation factor | 0.986 |
| rpsC | rplD | DR97_3654 | DR97_3649 | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | Large subunit ribosomal protein l4; One of the primary rRNA binding proteins, this protein initially binds near the 5'-end of the 23S rRNA. It is important during the early stages of 50S assembly. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome (By similarity). Forms part of the polypeptide exit tunnel | 0.999 |
| rpsC | rpsB | DR97_3654 | DR97_4283 | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | Small subunit ribosomal protein s2; Belongs to the universal ribosomal protein uS2 family | 0.999 |
| rpsC | rpsE | DR97_3654 | DR97_3665 | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | Small subunit ribosomal protein s5; With S4 and S12 plays an important role in translational accuracy | 0.999 |
| rpsC | rpsH | DR97_3654 | DR97_3662 | Small subunit ribosomal protein s3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation | Small subunit ribosomal protein s8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit | 0.999 |
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