STRINGSTRING
fdnG protein (Pseudomonas aeruginosa) - STRING interaction network
"fdnG" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fdnGannotation not available (196 aa)    
Predicted Functional Partners:
fdoG
formate-DH-alph- formate dehydrogenase, alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family (813 aa)
 
  0.995
fdxH
FDH-beta- formate dehydrogenase, beta subunit (309 aa)
 
 
  0.979
fdoI
formate-DH-gamm- formate dehydrogenase, gamma subunit (208 aa)
 
 
  0.961
fdhE
Protein FdhE homolog; Necessary for formate dehydrogenase activity (309 aa)
 
 
 
  0.945
selB
selB- selenocysteine-specific translation elongation factor (641 aa)
 
     
  0.894
selA
L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis (468 aa)
 
     
  0.894
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP (344 aa)
 
     
  0.570
fdhD
Sulfur carrier protein FdhD; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH (279 aa)
 
   
  0.568
gltB
annotation not available (1481 aa)
         
  0.564
napB
Periplasmic nitrate reductase, electron transfer subunit; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family (163 aa)
   
 
  0.546
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (18%) [HD]