osmE protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

osmE

annotation not available (114 aa)

Predicted Functional Partners:

osmC

0.756

DR97_4896

0.754

wrbA

0.712

DR97_936

0.707

ygiW

0.697

yfiO

0.680

DR97_5999

0.621

yqjC

0.615

yaeT

0.599

plpD

0.599

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_4896	osmC	DR97_4896	DR97_3016	DUF883 domain-containing protein	osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein	0.612
DR97_4896	osmE	DR97_4896	DR97_2227	DUF883 domain-containing protein	annotation not available	0.754
DR97_4896	wrbA	DR97_4896	DR97_989	DUF883 domain-containing protein	NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family	0.721
DR97_4896	ygiW	DR97_4896	DR97_3284	DUF883 domain-containing protein	annotation not available	0.568
DR97_4896	yqjC	DR97_4896	DR97_3511	DUF883 domain-containing protein	Uncharacterized protein	0.920
DR97_5999	osmE	DR97_5999	DR97_2227	Putative secreted protein	annotation not available	0.621
DR97_936	osmE	DR97_936	DR97_2227	annotation not available	annotation not available	0.707
DR97_936	plpD	DR97_936	DR97_4588	annotation not available	annotation not available	0.669
DR97_936	yaeT	DR97_936	DR97_4291	annotation not available	Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.738
DR97_936	yfiO	DR97_936	DR97_1848	annotation not available	Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.891
osmC	DR97_4896	DR97_3016	DR97_4896	osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein	DUF883 domain-containing protein	0.612
osmC	osmE	DR97_3016	DR97_2227	osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein	annotation not available	0.756
osmE	DR97_4896	DR97_2227	DR97_4896	annotation not available	DUF883 domain-containing protein	0.754
osmE	DR97_5999	DR97_2227	DR97_5999	annotation not available	Putative secreted protein	0.621
osmE	DR97_936	DR97_2227	DR97_936	annotation not available	annotation not available	0.707
osmE	osmC	DR97_2227	DR97_3016	annotation not available	osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein	0.756
osmE	plpD	DR97_2227	DR97_4588	annotation not available	annotation not available	0.599
osmE	wrbA	DR97_2227	DR97_989	annotation not available	NAD(P)H:quinone oxidoreductase, type IV; flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV; Belongs to the WrbA family	0.712
osmE	yaeT	DR97_2227	DR97_4291	annotation not available	Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.599
osmE	yfiO	DR97_2227	DR97_1848	annotation not available	Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane	0.680

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