STRINGSTRING
DR97_2228 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_2228" - Rho termination factor, N-terminal domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_2228Rho termination factor, N-terminal domain protein (135 aa)    
Predicted Functional Partners:
ttcA
tRNA-cytidine(32) 2-sulfurtransferase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system (274 aa)
           
  0.853
ectB
annotation not available (417 aa)
           
  0.756
rdgC
Recombination-associated protein RdgC; May be involved in recombination (306 aa)
           
  0.755
DR97_3840
annotation not available (527 aa)
           
  0.628
DR97_2229
annotation not available (270 aa)
              0.571
DR97_5
Uncharacterized protein (141 aa)
   
          0.567
DR97_3982
annotation not available (81 aa)
   
          0.550
DR97_6249
Uncharacterized protein (196 aa)
   
        0.536
DR97_695
annotation not available (590 aa)
   
        0.527
DR97_1834
Uncharacterized protein (90 aa)
     
 
  0.504
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (11%) [HD]