Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2321 | DR97_2323 | DR97_2321 | DR97_2323 | annotation not available | Uncharacterized protein; Putative dehydrogenase | 0.631 |
DR97_2321 | aspP | DR97_2321 | DR97_2324 | annotation not available | annotation not available | 0.781 |
DR97_2321 | cpdA | DR97_2321 | DR97_2322 | annotation not available | Calcineurin-like phosphoesterase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes | 0.915 |
DR97_2323 | DR97_2321 | DR97_2323 | DR97_2321 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.631 |
DR97_2323 | aspP | DR97_2323 | DR97_2324 | Uncharacterized protein; Putative dehydrogenase | annotation not available | 0.970 |
DR97_2323 | cpdA | DR97_2323 | DR97_2322 | Uncharacterized protein; Putative dehydrogenase | Calcineurin-like phosphoesterase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes | 0.825 |
NudE | algC | DR97_2544 | DR97_2693 | annotation not available | Phosphomannomutase / phosphoglucomutase; Highly reversible phosphoryltransferase. The phosphomannomutase activity produces a precursor for alginate polymerization, the alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core lipopolysaccaride (LPS) biosynthesis due to its phosphoglucomutase activity. Essential for rhamnolipid production, an exoproduct correlated with pathogenicity . Required for biofilm production. The reaction proceeds via 2 processive phosphoryl transferase reactions; first from enz [...] | 0.911 |
NudE | aspP | DR97_2544 | DR97_2324 | annotation not available | annotation not available | 0.802 |
NudE | prs | DR97_2544 | DR97_1980 | annotation not available | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P) | 0.905 |
algC | NudE | DR97_2693 | DR97_2544 | Phosphomannomutase / phosphoglucomutase; Highly reversible phosphoryltransferase. The phosphomannomutase activity produces a precursor for alginate polymerization, the alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core lipopolysaccaride (LPS) biosynthesis due to its phosphoglucomutase activity. Essential for rhamnolipid production, an exoproduct correlated with pathogenicity . Required for biofilm production. The reaction proceeds via 2 processive phosphoryl transferase reactions; first from enz [...] | annotation not available | 0.911 |
algC | aspP | DR97_2693 | DR97_2324 | Phosphomannomutase / phosphoglucomutase; Highly reversible phosphoryltransferase. The phosphomannomutase activity produces a precursor for alginate polymerization, the alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core lipopolysaccaride (LPS) biosynthesis due to its phosphoglucomutase activity. Essential for rhamnolipid production, an exoproduct correlated with pathogenicity . Required for biofilm production. The reaction proceeds via 2 processive phosphoryl transferase reactions; first from enz [...] | annotation not available | 0.911 |
algC | prs | DR97_2693 | DR97_1980 | Phosphomannomutase / phosphoglucomutase; Highly reversible phosphoryltransferase. The phosphomannomutase activity produces a precursor for alginate polymerization, the alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core lipopolysaccaride (LPS) biosynthesis due to its phosphoglucomutase activity. Essential for rhamnolipid production, an exoproduct correlated with pathogenicity . Required for biofilm production. The reaction proceeds via 2 processive phosphoryl transferase reactions; first from enz [...] | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P) | 0.915 |
aspP | DR97_2321 | DR97_2324 | DR97_2321 | annotation not available | annotation not available | 0.781 |
aspP | DR97_2323 | DR97_2324 | DR97_2323 | annotation not available | Uncharacterized protein; Putative dehydrogenase | 0.970 |
aspP | NudE | DR97_2324 | DR97_2544 | annotation not available | annotation not available | 0.802 |
aspP | algC | DR97_2324 | DR97_2693 | annotation not available | Phosphomannomutase / phosphoglucomutase; Highly reversible phosphoryltransferase. The phosphomannomutase activity produces a precursor for alginate polymerization, the alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core lipopolysaccaride (LPS) biosynthesis due to its phosphoglucomutase activity. Essential for rhamnolipid production, an exoproduct correlated with pathogenicity . Required for biofilm production. The reaction proceeds via 2 processive phosphoryl transferase reactions; first from enz [...] | 0.911 |
aspP | cpdA | DR97_2324 | DR97_2322 | annotation not available | Calcineurin-like phosphoesterase family protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes | 0.897 |
aspP | dusA | DR97_2324 | DR97_5148 | annotation not available | Trna dihydrouridine synthase a family protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs | 0.870 |
aspP | etfA | DR97_2324 | DR97_4988 | annotation not available | Electron transfer flavoprotein alpha subunit; The electron transfer flavoprotein serves as a specific electron acceptor for other dehydrogenases. It transfers the electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase (ETF dehydrogenase) (By similarity) | 0.681 |
aspP | gabD | DR97_2324 | DR97_3227 | annotation not available | Succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase; Catalyzes the conversion of 5-oxopentanoate (glutarate semialdehyde) to glutarate. Involved in L-lysine degradation | 0.697 |
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