Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2336 | DR97_2338 | DR97_2336 | DR97_2338 | annotation not available | annotation not available | 0.793 |
DR97_2336 | DR97_2339 | DR97_2336 | DR97_2339 | annotation not available | annotation not available | 0.492 |
DR97_2336 | DR97_2340 | DR97_2336 | DR97_2340 | annotation not available | NADH:flavin oxidoreductase / NADH oxidase family protein | 0.522 |
DR97_2336 | DR97_2341 | DR97_2336 | DR97_2341 | annotation not available | annotation not available | 0.434 |
DR97_2336 | aruR | DR97_2336 | DR97_2337 | annotation not available | Putative two-component response regulator; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Regulates transcription of aruH and aruI | 0.935 |
DR97_2338 | DR97_2336 | DR97_2338 | DR97_2336 | annotation not available | annotation not available | 0.793 |
DR97_2338 | DR97_2339 | DR97_2338 | DR97_2339 | annotation not available | annotation not available | 0.630 |
DR97_2338 | DR97_2340 | DR97_2338 | DR97_2340 | annotation not available | NADH:flavin oxidoreductase / NADH oxidase family protein | 0.677 |
DR97_2338 | DR97_2341 | DR97_2338 | DR97_2341 | annotation not available | annotation not available | 0.441 |
DR97_2338 | aruR | DR97_2338 | DR97_2337 | annotation not available | Putative two-component response regulator; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Regulates transcription of aruH and aruI | 0.704 |
DR97_2339 | DR97_2336 | DR97_2339 | DR97_2336 | annotation not available | annotation not available | 0.492 |
DR97_2339 | DR97_2338 | DR97_2339 | DR97_2338 | annotation not available | annotation not available | 0.630 |
DR97_2339 | DR97_2340 | DR97_2339 | DR97_2340 | annotation not available | NADH:flavin oxidoreductase / NADH oxidase family protein | 0.729 |
DR97_2339 | DR97_2341 | DR97_2339 | DR97_2341 | annotation not available | annotation not available | 0.442 |
DR97_2339 | DR97_3572 | DR97_2339 | DR97_3572 | annotation not available | Putative spermidine/putrescine transport system atp-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system | 0.721 |
DR97_2339 | DR97_3574 | DR97_2339 | DR97_3574 | annotation not available | annotation not available | 0.829 |
DR97_2339 | DR97_3575 | DR97_2339 | DR97_3575 | annotation not available | annotation not available | 0.825 |
DR97_2339 | aruR | DR97_2339 | DR97_2337 | annotation not available | Putative two-component response regulator; Member of the two-component regulatory system AruS/AruR, which is involved in the regulation of the arginine transaminase (ATA) pathway in response to exogeneous L-arginine. Regulates transcription of aruH and aruI | 0.433 |
DR97_2339 | quiC1 | DR97_2339 | DR97_3199 | annotation not available | Xylose isomerase-like tim barrel family protein; Catalyzes the conversion of 3-dehydroshikimate to protocatechuate (3,4-dihydroxybenzoate), a common intermediate of quinate and shikimate degradation pathways. Is required for growth on either quinate or shikimate as a sole carbon source | 0.431 |
DR97_2340 | DR97_2336 | DR97_2340 | DR97_2336 | NADH:flavin oxidoreductase / NADH oxidase family protein | annotation not available | 0.522 |
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