Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2359 | DR97_2361 | DR97_2359 | DR97_2361 | annotation not available | annotation not available | 0.917 |
| DR97_2359 | WaaX | DR97_2359 | DR97_2363 | annotation not available | annotation not available | 0.811 |
| DR97_2359 | WapQ | DR97_2359 | DR97_2362 | annotation not available | annotation not available | 0.849 |
| DR97_2359 | rfaC | DR97_2359 | DR97_2366 | annotation not available | heptsyl_trn_I: lipopolysaccharide heptosyltransferase I | 0.735 |
| DR97_2359 | rfaF | DR97_2359 | DR97_2367 | annotation not available | ADP-heptose:LPS heptosyltransferase homolog; heptsyl_trn_II: lipopolysaccharide heptosyltransferase II | 0.778 |
| DR97_2359 | rfaP | DR97_2359 | DR97_2364 | annotation not available | Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core. The phosphorylation of the lipopolysaccharide core seems to occur prior to translocation to the periplasm and attachment of O-antigen. Also has protein-tyrosine kinase activity: autophosphorylates on all Tyr residues; in vitro can phosphorylate poly(Glu,Tyr) | 0.857 |
| DR97_2359 | waaG | DR97_2359 | DR97_2365 | annotation not available | annotation not available | 0.750 |
| DR97_2361 | DR97_2359 | DR97_2361 | DR97_2359 | annotation not available | annotation not available | 0.917 |
| DR97_2361 | WaaX | DR97_2361 | DR97_2363 | annotation not available | annotation not available | 0.981 |
| DR97_2361 | WapQ | DR97_2361 | DR97_2362 | annotation not available | annotation not available | 0.982 |
| DR97_2361 | rfaC | DR97_2361 | DR97_2366 | annotation not available | heptsyl_trn_I: lipopolysaccharide heptosyltransferase I | 0.956 |
| DR97_2361 | rfaF | DR97_2361 | DR97_2367 | annotation not available | ADP-heptose:LPS heptosyltransferase homolog; heptsyl_trn_II: lipopolysaccharide heptosyltransferase II | 0.951 |
| DR97_2361 | rfaP | DR97_2361 | DR97_2364 | annotation not available | Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core. The phosphorylation of the lipopolysaccharide core seems to occur prior to translocation to the periplasm and attachment of O-antigen. Also has protein-tyrosine kinase activity: autophosphorylates on all Tyr residues; in vitro can phosphorylate poly(Glu,Tyr) | 0.972 |
| DR97_2361 | waaG | DR97_2361 | DR97_2365 | annotation not available | annotation not available | 0.980 |
| WaaL | WaaX | DR97_2354 | DR97_2363 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | annotation not available | 0.423 |
| WaaL | rfaC | DR97_2354 | DR97_2366 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | heptsyl_trn_I: lipopolysaccharide heptosyltransferase I | 0.871 |
| WaaL | rfaF | DR97_2354 | DR97_2367 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | ADP-heptose:LPS heptosyltransferase homolog; heptsyl_trn_II: lipopolysaccharide heptosyltransferase II | 0.770 |
| WaaL | rfaP | DR97_2354 | DR97_2364 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core. The phosphorylation of the lipopolysaccharide core seems to occur prior to translocation to the periplasm and attachment of O-antigen. Also has protein-tyrosine kinase activity: autophosphorylates on all Tyr residues; in vitro can phosphorylate poly(Glu,Tyr) | 0.878 |
| WaaL | waaG | DR97_2354 | DR97_2365 | O-antigen ligase family protein; Potential O-antigen polymerase, which may be involved in the synthesis of LPS | annotation not available | 0.532 |
| WaaX | DR97_2359 | DR97_2363 | DR97_2359 | annotation not available | annotation not available | 0.811 |
page 1 of 4
STRING Database User Survey
