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benE protein (Pseudomonas aeruginosa) - STRING interaction network
benE: benzoate transporter family protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
benEbenE- benzoate transporter family protein (398 aa)    
Predicted Functional Partners:
lvr
annotation not available (253 aa)
   
   
  0.930
catC
Muco_delta- muconolactone delta-isomerase (96 aa)
         
  0.900
opdK
annotation not available (417 aa)
   
     
  0.882
benB
benzo_1_2_benB- benzoate 1,2-dioxygenase, small subunit (162 aa)
         
  0.875
catR
annotation not available (290 aa)
         
  0.867
benK
annotation not available (446 aa)
           
  0.853
benC
annotation not available (337 aa)
         
  0.800
catA
Catechol_proteo- catechol 1,2-dioxygenase (310 aa)
         
  0.694
DR97_6217
annotation not available (416 aa)
 
        0.497
DR97_236
annotation not available (211 aa)
              0.492
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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