Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2973 | PilC | DR97_2973 | DR97_1708 | annotation not available | annotation not available | 0.634 |
DR97_2973 | fimU | DR97_2973 | DR97_1854 | annotation not available | annotation not available | 0.609 |
DR97_2973 | pilE | DR97_2973 | DR97_1860 | annotation not available | Type iv pilus assembly protein pile; Type 4 fimbrial biogenesis protein PilE; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.602 |
DR97_2973 | pilF | DR97_2973 | DR97_4064 | annotation not available | Uncharacterized protein; type_IV_pilW: type IV pilus biogenesis/stability protein PilW | 0.728 |
DR97_2973 | pilM | DR97_2973 | DR97_2399 | annotation not available | pilM: type IV pilus assembly PilM family protein | 0.850 |
DR97_2973 | pilN | DR97_2973 | DR97_2398 | annotation not available | annotation not available | 0.892 |
DR97_2973 | pilO | DR97_2973 | DR97_2397 | annotation not available | annotation not available | 0.892 |
DR97_2973 | pilP | DR97_2973 | DR97_2396 | annotation not available | annotation not available | 0.856 |
DR97_2973 | pilQ | DR97_2973 | DR97_2395 | annotation not available | Type 4 fimbrial biogenesis outer membrane protein; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane | 0.858 |
DR97_2973 | pilZ | DR97_2973 | DR97_4979 | annotation not available | annotation not available | 0.776 |
PilC | DR97_2973 | DR97_1708 | DR97_2973 | annotation not available | annotation not available | 0.634 |
PilC | fimU | DR97_1708 | DR97_1854 | annotation not available | annotation not available | 0.893 |
PilC | pilE | DR97_1708 | DR97_1860 | annotation not available | Type iv pilus assembly protein pile; Type 4 fimbrial biogenesis protein PilE; IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain protein | 0.946 |
PilC | pilF | DR97_1708 | DR97_4064 | annotation not available | Uncharacterized protein; type_IV_pilW: type IV pilus biogenesis/stability protein PilW | 0.903 |
PilC | pilM | DR97_1708 | DR97_2399 | annotation not available | pilM: type IV pilus assembly PilM family protein | 0.767 |
PilC | pilN | DR97_1708 | DR97_2398 | annotation not available | annotation not available | 0.963 |
PilC | pilO | DR97_1708 | DR97_2397 | annotation not available | annotation not available | 0.948 |
PilC | pilP | DR97_1708 | DR97_2396 | annotation not available | annotation not available | 0.934 |
PilC | pilQ | DR97_1708 | DR97_2395 | annotation not available | Type 4 fimbrial biogenesis outer membrane protein; Essential for the formation of pili. Involved in the biogenesis of type 4 fimbriae probably by serving as a 'porthole' allowing passage of the fimbrae through the outer membrane | 0.945 |
PilC | pilZ | DR97_1708 | DR97_4979 | annotation not available | annotation not available | 0.608 |
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