glnQ3 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

glnQ3

annotation not available (244 aa)

Predicted Functional Partners:

glnP

0.989

fliY_1

0.931

gltK

0.895

yecS_4

0.895

DR97_6227

0.882

gltJ

0.875

DR97_6228

0.869

DR97_680

0.864

DR97_679

0.863

occM1

0.858

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_6227	DR97_6228	DR97_6227	DR97_6228	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.961
DR97_6227	fliY_1	DR97_6227	DR97_2431	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	0.766
DR97_6227	glnQ3	DR97_6227	DR97_2429	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	annotation not available	0.882
DR97_6227	gltK	DR97_6227	DR97_454	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.588
DR97_6228	DR97_6227	DR97_6228	DR97_6227	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.961
DR97_6228	fliY_1	DR97_6228	DR97_2431	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	0.657
DR97_6228	glnQ3	DR97_6228	DR97_2429	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	annotation not available	0.869
DR97_679	DR97_680	DR97_679	DR97_680	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.963
DR97_679	fliY_1	DR97_679	DR97_2431	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	0.671
DR97_679	glnQ3	DR97_679	DR97_2429	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	annotation not available	0.863
DR97_680	DR97_679	DR97_680	DR97_679	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.963
DR97_680	fliY_1	DR97_680	DR97_2431	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	0.669
DR97_680	glnQ3	DR97_680	DR97_2429	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	annotation not available	0.864
fliY_1	DR97_6227	DR97_2431	DR97_6227	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	Amino acid permease; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.766
fliY_1	DR97_6228	DR97_2431	DR97_6228	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.657
fliY_1	DR97_679	DR97_2431	DR97_679	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.671
fliY_1	DR97_680	DR97_2431	DR97_680	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.669
fliY_1	glnP	DR97_2431	DR97_2430	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	Glutamine transport system permease protein GlnP; HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.959
fliY_1	glnQ3	DR97_2431	DR97_2429	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	annotation not available	0.931
fliY_1	gltJ	DR97_2431	DR97_453	Amino acid ABC transporter substrate-binding protein; BINDING COMPONENT OF ABC TRANSPORTER; Belongs to the bacterial solute-binding protein 3 family	HEQRo_perm_3TM- amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein	0.653

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