STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
opgGPeriplasmic glucan biosynthesis , mdog family protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs) (511 aa)    
Predicted Functional Partners:
opgH
Glycosyl transferase 2 family protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs)
 
  
 0.998
DR97_2431
Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family
       0.619
DR97_1634
annotation not available
      
 0.578
bglX
Periplasmic beta-glucosidase; Belongs to the glycosyl hydrolase 3 family
 
     0.461
pyrB
Aspartate carbamoyltransferase catalytic subunit; Asp_carb_tr: aspartate carbamoyltransferase; Belongs to the ATCase/OTCase family
      
 0.458
cobQ
Adenosylcobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation
      
 0.443
DR97_3914
Hypothetical protein; Uncharacterized protein
  
   
 0.415
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.