Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2447 | ProV | DR97_2447 | DR97_2448 | annotation not available | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | 0.930 |
DR97_2447 | ProW | DR97_2447 | DR97_2449 | annotation not available | annotation not available | 0.929 |
DR97_2447 | ProX | DR97_2447 | DR97_2450 | annotation not available | annotation not available | 0.908 |
DR97_2447 | hisD | DR97_2447 | DR97_1626 | annotation not available | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine | 0.922 |
DR97_2447 | hutC | DR97_2447 | DR97_2459 | annotation not available | Gntr family transcriptional regulator, histidine utilization repressor; Repressor which binds to the hutP region in the histidine utilization (hut) operon. It blocks the expression of all the hut genes in the absence of inducer (By similarity) | 0.913 |
DR97_2447 | hutF | DR97_2447 | DR97_2460 | annotation not available | N-formimino-l-glutamate deiminase; hutF: formiminoglutamate deiminase | 0.943 |
DR97_2447 | hutG | DR97_2447 | DR97_2445 | annotation not available | N-formylglutamate amidohydrolase; hutG_amidohyd: N-formylglutamate deformylase | 0.981 |
DR97_2447 | hutH | DR97_2447 | DR97_2452 | annotation not available | Histidine ammonia-lyase; Belongs to the PAL/histidase family | 0.958 |
DR97_2447 | hutI | DR97_2447 | DR97_2446 | annotation not available | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family | 0.999 |
DR97_2447 | hutU | DR97_2447 | DR97_2454 | annotation not available | Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate | 0.998 |
ProV | DR97_2447 | DR97_2448 | DR97_2447 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | annotation not available | 0.930 |
ProV | ProW | DR97_2448 | DR97_2449 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | annotation not available | 0.999 |
ProV | ProX | DR97_2448 | DR97_2450 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | annotation not available | 0.998 |
ProV | hutG | DR97_2448 | DR97_2445 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | N-formylglutamate amidohydrolase; hutG_amidohyd: N-formylglutamate deformylase | 0.929 |
ProV | hutH | DR97_2448 | DR97_2452 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | Histidine ammonia-lyase; Belongs to the PAL/histidase family | 0.751 |
ProV | hutI | DR97_2448 | DR97_2446 | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | Imidazolonepropionase; Belongs to the metallo-dependent hydrolases superfamily. HutI family | 0.924 |
ProW | DR97_2447 | DR97_2449 | DR97_2447 | annotation not available | annotation not available | 0.929 |
ProW | ProV | DR97_2449 | DR97_2448 | annotation not available | Glycine betaine/proline transport system atp-binding protein; proV: glycine betaine/L-proline transport ATP binding subunit | 0.999 |
ProW | ProX | DR97_2449 | DR97_2450 | annotation not available | annotation not available | 0.999 |
ProW | hutG | DR97_2449 | DR97_2445 | annotation not available | N-formylglutamate amidohydrolase; hutG_amidohyd: N-formylglutamate deformylase | 0.921 |
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