Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1334 | YigN | DR97_1334 | DR97_2484 | Thioredoxin: thioredoxin | annotation not available | 0.430 |
DR97_1334 | gor | DR97_1334 | DR97_5822 | Thioredoxin: thioredoxin | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | 0.641 |
DR97_1334 | grxC | DR97_1334 | DR97_2483 | Thioredoxin: thioredoxin | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.613 |
DR97_1334 | grxD | DR97_1334 | DR97_4409 | Thioredoxin: thioredoxin | Monothiol glutaredoxin, grx4 family; Belongs to the glutaredoxin family. Monothiol subfamily | 0.589 |
DR97_1334 | trxB1 | DR97_1334 | DR97_5346 | Thioredoxin: thioredoxin | TRX_reduct: thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family | 0.863 |
DR97_5120 | gor | DR97_5120 | DR97_5822 | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | 0.987 |
DR97_5120 | grxC | DR97_5120 | DR97_2483 | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.649 |
YigN | DR97_1334 | DR97_2484 | DR97_1334 | annotation not available | Thioredoxin: thioredoxin | 0.430 |
YigN | grxC | DR97_2484 | DR97_2483 | annotation not available | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.906 |
YigN | secB | DR97_2484 | DR97_2482 | annotation not available | Preprotein translocase subunit secb; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA | 0.853 |
fdx | grxC | DR97_4060 | DR97_2483 | Ferredoxin, 2fe-2s type, isc system; Ferredoxin are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.594 |
gor | DR97_1334 | DR97_5822 | DR97_1334 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Thioredoxin: thioredoxin | 0.641 |
gor | DR97_5120 | DR97_5822 | DR97_5120 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | 0.987 |
gor | grxC | DR97_5822 | DR97_2483 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.862 |
gor | trxA | DR97_5822 | DR97_2610 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Thioredoxin 1; Participates in various redox reactions through the reversible oxidation of its active center dithiol to a disulfide and catalyzes dithiol-disulfide exchange reactions | 0.762 |
gor | trxB1 | DR97_5822 | DR97_5346 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | TRX_reduct: thioredoxin-disulfide reductase; Belongs to the class-II pyridine nucleotide-disulfide oxidoreductase family | 0.944 |
gpsA | grxC | DR97_275 | DR97_2483 | Nad(p)h-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | 0.602 |
gpsA | secB | DR97_275 | DR97_2482 | Nad(p)h-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family | Preprotein translocase subunit secb; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA | 0.721 |
grxC | DR97_1334 | DR97_2483 | DR97_1334 | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | Thioredoxin: thioredoxin | 0.613 |
grxC | DR97_5120 | DR97_2483 | DR97_5120 | Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins (By similarity) | Putative glutathione s-transferase; Glutathione S-transferase, N-terminal domain protein | 0.649 |
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