Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2429 | DR97_2520 | DR97_2429 | DR97_2520 | annotation not available | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.802 |
DR97_2429 | DR97_2521 | DR97_2429 | DR97_2521 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.831 |
DR97_2429 | DR97_2522 | DR97_2429 | DR97_2522 | annotation not available | Octopine transport system permease protein occM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.883 |
DR97_2429 | DR97_4001 | DR97_2429 | DR97_4001 | annotation not available | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | 0.786 |
DR97_2429 | FliY | DR97_2429 | DR97_3278 | annotation not available | Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family | 0.779 |
DR97_2429 | aotJ | DR97_2429 | DR97_1055 | annotation not available | Arginine/ornithine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.794 |
DR97_2429 | hisJ | DR97_2429 | DR97_5018 | annotation not available | annotation not available | 0.732 |
DR97_2519 | DR97_2520 | DR97_2519 | DR97_2520 | annotation not available | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.991 |
DR97_2519 | DR97_2521 | DR97_2519 | DR97_2521 | annotation not available | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.989 |
DR97_2519 | DR97_2522 | DR97_2519 | DR97_2522 | annotation not available | Octopine transport system permease protein occM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.986 |
DR97_2519 | DR97_4001 | DR97_2519 | DR97_4001 | annotation not available | Arginine/ornithine transport system substrate-binding protein; 3A0103s03R: lysine-arginine-ornithine-binding periplasmic family protein | 0.796 |
DR97_2519 | FliY | DR97_2519 | DR97_3278 | annotation not available | Bacterial extracellular solute-binding s, 3 family protein; Belongs to the bacterial solute-binding protein 3 family | 0.665 |
DR97_2519 | aotJ | DR97_2519 | DR97_1055 | annotation not available | Arginine/ornithine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | 0.769 |
DR97_2519 | hisJ | DR97_2519 | DR97_5018 | annotation not available | annotation not available | 0.787 |
DR97_2520 | DR97_2429 | DR97_2520 | DR97_2429 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.802 |
DR97_2520 | DR97_2519 | DR97_2520 | DR97_2519 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.991 |
DR97_2520 | DR97_2521 | DR97_2520 | DR97_2521 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.994 |
DR97_2520 | DR97_2522 | DR97_2520 | DR97_2522 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | Octopine transport system permease protein occM; HEQRo_perm_3TM: amino ABC transporter, permease , 3-TM region, His/Glu/Gln/Arg/opine family domain protein | 0.995 |
DR97_2520 | GlnQ | DR97_2520 | DR97_681 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.798 |
DR97_2520 | GltL | DR97_2520 | DR97_455 | Putative lysine/arginine/ornithine/histidine/octopine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family | annotation not available | 0.785 |
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