Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CpxR | YgaU | DR97_4731 | DR97_2546 | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | Hypothetical protein; LysM domain/BON superfamily protein | 0.689 |
DR97_3294 | DR97_4896 | DR97_3294 | DR97_4896 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | Hypothetical protein; DUF883 domain-containing protein | 0.567 |
DR97_3294 | DR97_975 | DR97_3294 | DR97_975 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | Starvation-inducible dna-binding protein; Belongs to the Dps family | 0.473 |
DR97_3294 | PrkA | DR97_3294 | DR97_3557 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | prkA serine kinase C-terminal domain protein | 0.675 |
DR97_3294 | YcgB | DR97_3294 | DR97_3555 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | annotation not available | 0.735 |
DR97_3294 | YgaU | DR97_3294 | DR97_2546 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | Hypothetical protein; LysM domain/BON superfamily protein | 0.903 |
DR97_3294 | osmC | DR97_3294 | DR97_3016 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein | 0.507 |
DR97_3294 | wrbA | DR97_3294 | DR97_989 | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.592 |
DR97_4896 | DR97_3294 | DR97_4896 | DR97_3294 | Hypothetical protein; DUF883 domain-containing protein | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | 0.567 |
DR97_4896 | DR97_975 | DR97_4896 | DR97_975 | Hypothetical protein; DUF883 domain-containing protein | Starvation-inducible dna-binding protein; Belongs to the Dps family | 0.528 |
DR97_4896 | PrkA | DR97_4896 | DR97_3557 | Hypothetical protein; DUF883 domain-containing protein | prkA serine kinase C-terminal domain protein | 0.632 |
DR97_4896 | YgaU | DR97_4896 | DR97_2546 | Hypothetical protein; DUF883 domain-containing protein | Hypothetical protein; LysM domain/BON superfamily protein | 0.721 |
DR97_4896 | YqjC | DR97_4896 | DR97_3511 | Hypothetical protein; DUF883 domain-containing protein | Hypothetical protein; Uncharacterized protein | 0.916 |
DR97_4896 | osmC | DR97_4896 | DR97_3016 | Hypothetical protein; DUF883 domain-containing protein | osmo_induc_OsmC: peroxiredoxin, OsmC subfamily protein | 0.609 |
DR97_4896 | wrbA | DR97_4896 | DR97_989 | Hypothetical protein; DUF883 domain-containing protein | Nad(p)h dehydrogenase (quinone); Belongs to the WrbA family | 0.740 |
DR97_975 | DR97_3294 | DR97_975 | DR97_3294 | Starvation-inducible dna-binding protein; Belongs to the Dps family | Uncharacterized protein; Belongs to the UPF0339 family. Duplicated subfamily | 0.473 |
DR97_975 | DR97_4896 | DR97_975 | DR97_4896 | Starvation-inducible dna-binding protein; Belongs to the Dps family | Hypothetical protein; DUF883 domain-containing protein | 0.528 |
DR97_975 | PrkA | DR97_975 | DR97_3557 | Starvation-inducible dna-binding protein; Belongs to the Dps family | prkA serine kinase C-terminal domain protein | 0.590 |
DR97_975 | YcgB | DR97_975 | DR97_3555 | Starvation-inducible dna-binding protein; Belongs to the Dps family | annotation not available | 0.493 |
DR97_975 | YgaU | DR97_975 | DR97_2546 | Starvation-inducible dna-binding protein; Belongs to the Dps family | Hypothetical protein; LysM domain/BON superfamily protein | 0.689 |
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