Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CpxR | DR97_3759 | DR97_4731 | DR97_3759 | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | annotation not available | 0.989 |
CpxR | RcsB | DR97_4731 | DR97_3787 | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | annotation not available | 0.761 |
CpxR | amgS | DR97_4731 | DR97_2568 | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | annotation not available | 0.954 |
CpxR | gacA | DR97_4731 | DR97_5459 | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | Two-component system, narl family, invasion response regulator uvry; Positively controls the production of the autoinducer N- butyryl-homoserine lactone and the formation of the virulence factors pyocyanine, cyanide, and lipase | 0.504 |
DR97_3759 | CpxR | DR97_3759 | DR97_4731 | annotation not available | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | 0.989 |
DR97_3759 | DR97_5145 | DR97_3759 | DR97_5145 | annotation not available | annotation not available | 0.995 |
DR97_3759 | RcsB | DR97_3759 | DR97_3787 | annotation not available | annotation not available | 0.808 |
DR97_3759 | amgR | DR97_3759 | DR97_2569 | annotation not available | Two-component system, ompr family, phosphate regulon response regulator ompr; Transcriptional regulatory , C terminal family protein | 0.989 |
DR97_3759 | amgS | DR97_3759 | DR97_2568 | annotation not available | annotation not available | 0.734 |
DR97_3759 | gacA | DR97_3759 | DR97_5459 | annotation not available | Two-component system, narl family, invasion response regulator uvry; Positively controls the production of the autoinducer N- butyryl-homoserine lactone and the formation of the virulence factors pyocyanine, cyanide, and lipase | 0.802 |
DR97_3759 | gltR | DR97_3759 | DR97_4744 | annotation not available | Two-component system, ompr family, response regulator; Transcriptional regulatory , C terminal family protein | 0.989 |
DR97_3759 | parR | DR97_3759 | DR97_81 | annotation not available | Two-component system, ompr family, response regulator parr; Transcriptional regulatory , C terminal family protein | 0.989 |
DR97_3759 | phoB | DR97_3759 | DR97_2731 | annotation not available | Two-component system, ompr family, phosphate regulon response regulator phob; This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited | 0.989 |
DR97_3759 | phoP | DR97_3759 | DR97_755 | annotation not available | annotation not available | 0.989 |
DR97_5145 | DR97_3759 | DR97_5145 | DR97_3759 | annotation not available | annotation not available | 0.995 |
DR97_5145 | amgS | DR97_5145 | DR97_2568 | annotation not available | annotation not available | 0.651 |
RcsB | CpxR | DR97_3787 | DR97_4731 | annotation not available | Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein | 0.761 |
RcsB | DR97_3759 | DR97_3787 | DR97_3759 | annotation not available | annotation not available | 0.808 |
RcsB | amgR | DR97_3787 | DR97_2569 | annotation not available | Two-component system, ompr family, phosphate regulon response regulator ompr; Transcriptional regulatory , C terminal family protein | 0.871 |
RcsB | amgS | DR97_3787 | DR97_2568 | annotation not available | annotation not available | 0.759 |
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