STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amgSannotation not available (439 aa)    
Predicted Functional Partners:
amgR
Two-component system, ompr family, phosphate regulon response regulator ompr; Transcriptional regulatory , C terminal family protein
 0.999
CpxR
Two-component system, ompr family, response regulator cpxr; Transcriptional regulatory , C terminal family protein
 
 0.954
gltR
Two-component system, ompr family, response regulator; Transcriptional regulatory , C terminal family protein
 
 0.884
phoP
annotation not available
 
 
 
 0.806
parR
Two-component system, ompr family, response regulator parr; Transcriptional regulatory , C terminal family protein
 
 
 0.777
phoB
Two-component system, ompr family, phosphate regulon response regulator phob; This protein is a positive regulator for the phosphate regulon. Transcription of this operon is positively regulated by PhoB and PhoR when phosphate is limited
 
 
 
 0.764
RcsB
annotation not available
   
 
 0.759
DR97_3759
annotation not available
   
 
 0.734
gacA
Two-component system, narl family, invasion response regulator uvry; Positively controls the production of the autoinducer N- butyryl-homoserine lactone and the formation of the virulence factors pyocyanine, cyanide, and lipase
  
 
 
 0.663
DR97_5145
annotation not available
 
 
 0.651
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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