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pepP protein (Pseudomonas aeruginosa) - STRING interaction network
"pepP" - Aminopeptidase P, N-terminal domain protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepPAminopeptidase P, N-terminal domain protein (444 aa)    
Predicted Functional Partners:
ubiH
ubiH- 2-polyprenyl-6-methoxyphenol 4-hydroxylase (394 aa)
 
   
  0.985
DR97_2591
Conserved hypothetical protein (160 aa)
   
        0.944
DR97_2594
UPF0149 protein AO964_23485; Belongs to the UPF0149 family (165 aa)
 
   
  0.930
DR97_2590
2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinolhydroxylase; ubi-OHases- ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family protein (405 aa)
 
   
  0.883
hemY
annotation not available (412 aa)
   
   
  0.804
bolA
annotation not available (101 aa)
 
 
  0.754
zapA
Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division (104 aa)
 
          0.719
DR97_2595
annotation not available (69 aa)
 
          0.698
clpA
clpA- ATP-dependent Clp protease ATP-binding subunit ClpA (758 aa)
     
   
  0.605
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5’-3’ exonuclease activity (913 aa)
   
   
  0.604
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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