Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_264 | DR97_265 | DR97_264 | DR97_265 | Hypothetical protein; Putative inner membrane protein | Hypothetical protein; Uncharacterized protein | 0.640 |
DR97_264 | DR97_266 | DR97_264 | DR97_266 | Hypothetical protein; Putative inner membrane protein | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | 0.510 |
DR97_264 | DR97_268 | DR97_264 | DR97_268 | Hypothetical protein; Putative inner membrane protein | annotation not available | 0.417 |
DR97_264 | pgpA | DR97_264 | DR97_3817 | Hypothetical protein; Putative inner membrane protein | Phosphatidylglycerophosphatase a family protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) | 0.426 |
DR97_264 | scpB | DR97_264 | DR97_4738 | Hypothetical protein; Putative inner membrane protein | Segregation and condensation protein b; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves | 0.537 |
DR97_265 | DR97_264 | DR97_265 | DR97_264 | Hypothetical protein; Uncharacterized protein | Hypothetical protein; Putative inner membrane protein | 0.640 |
DR97_265 | DR97_266 | DR97_265 | DR97_266 | Hypothetical protein; Uncharacterized protein | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | 0.854 |
DR97_265 | DR97_268 | DR97_265 | DR97_268 | Hypothetical protein; Uncharacterized protein | annotation not available | 0.673 |
DR97_266 | DR97_264 | DR97_266 | DR97_264 | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | Hypothetical protein; Putative inner membrane protein | 0.510 |
DR97_266 | DR97_265 | DR97_266 | DR97_265 | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | Hypothetical protein; Uncharacterized protein | 0.854 |
DR97_266 | DR97_268 | DR97_266 | DR97_268 | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | annotation not available | 0.627 |
DR97_268 | DR97_264 | DR97_268 | DR97_264 | annotation not available | Hypothetical protein; Putative inner membrane protein | 0.417 |
DR97_268 | DR97_265 | DR97_268 | DR97_265 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.673 |
DR97_268 | DR97_266 | DR97_268 | DR97_266 | annotation not available | Gsh-dependent disulfide-bond oxidoreductase; Belongs to the GST superfamily | 0.627 |
pgpA | DR97_264 | DR97_3817 | DR97_264 | Phosphatidylglycerophosphatase a family protein; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG) | Hypothetical protein; Putative inner membrane protein | 0.426 |
scpB | DR97_264 | DR97_4738 | DR97_264 | Segregation and condensation protein b; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves | Hypothetical protein; Putative inner membrane protein | 0.537 |