Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1607 | DR97_2699 | DR97_1607 | DR97_2699 | annotation not available | annotation not available | 0.580 |
DR97_1607 | cc4 | DR97_1607 | DR97_2868 | annotation not available | Cytochrome c4 precursor; Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems | 0.896 |
DR97_1607 | ccmH | DR97_1607 | DR97_541 | annotation not available | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.485 |
DR97_1607 | ccoO1 | DR97_1607 | DR97_382 | annotation not available | ccoO: cytochrome c oxidase, cbb3-type, subunit II | 0.400 |
DR97_1607 | ccoP1 | DR97_1607 | DR97_384 | annotation not available | Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex | 0.407 |
DR97_1607 | ccoP2 | DR97_1607 | DR97_380 | annotation not available | Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex | 0.401 |
DR97_1607 | nirM | DR97_1607 | DR97_3486 | annotation not available | Cytochrome c-551 precursor; Electron donor for cytochrome cd1 in nitrite and nitrate respiration | 0.851 |
DR97_1607 | pvcD | DR97_1607 | DR97_6293 | annotation not available | annotation not available | 0.891 |
DR97_2697 | DR97_2698 | DR97_2697 | DR97_2698 | Hypothetical protein; Alanine racemase, N-terminal domain protein | bact_FAD_ox: FAD-linked oxidoreductase family protein | 0.970 |
DR97_2697 | DR97_2699 | DR97_2697 | DR97_2699 | Hypothetical protein; Alanine racemase, N-terminal domain protein | annotation not available | 0.890 |
DR97_2698 | DR97_2697 | DR97_2698 | DR97_2697 | bact_FAD_ox: FAD-linked oxidoreductase family protein | Hypothetical protein; Alanine racemase, N-terminal domain protein | 0.970 |
DR97_2698 | DR97_2699 | DR97_2698 | DR97_2699 | bact_FAD_ox: FAD-linked oxidoreductase family protein | annotation not available | 0.914 |
DR97_2699 | DR97_1607 | DR97_2699 | DR97_1607 | annotation not available | annotation not available | 0.580 |
DR97_2699 | DR97_2697 | DR97_2699 | DR97_2697 | annotation not available | Hypothetical protein; Alanine racemase, N-terminal domain protein | 0.890 |
DR97_2699 | DR97_2698 | DR97_2699 | DR97_2698 | annotation not available | bact_FAD_ox: FAD-linked oxidoreductase family protein | 0.914 |
DR97_2699 | cc4 | DR97_2699 | DR97_2868 | annotation not available | Cytochrome c4 precursor; Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems | 0.587 |
DR97_2699 | ccmH | DR97_2699 | DR97_541 | annotation not available | Cytochrome c-type biogenesis protein ccmh; Required for the biogenesis of c-type cytochromes. Possible subunit of a heme lyase (By similarity) | 0.693 |
DR97_2699 | ccoO1 | DR97_2699 | DR97_382 | annotation not available | ccoO: cytochrome c oxidase, cbb3-type, subunit II | 0.637 |
DR97_2699 | ccoP1 | DR97_2699 | DR97_384 | annotation not available | Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex | 0.652 |
DR97_2699 | ccoP2 | DR97_2699 | DR97_380 | annotation not available | Cbb3-type putative cytochrome c oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex | 0.650 |
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