Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2704 | YicC | DR97_2704 | DR97_2706 | annotation not available | Hypothetical protein; YicC family protein | 0.525 |
| DR97_2704 | gmk | DR97_2704 | DR97_2707 | annotation not available | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | 0.408 |
| DR97_2704 | queF | DR97_2704 | DR97_5137 | annotation not available | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) | 0.497 |
| DR97_2704 | rph | DR97_2704 | DR97_2705 | annotation not available | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | 0.794 |
| YicC | DR97_2704 | DR97_2706 | DR97_2704 | Hypothetical protein; YicC family protein | annotation not available | 0.525 |
| YicC | gmk | DR97_2706 | DR97_2707 | Hypothetical protein; YicC family protein | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | 0.810 |
| YicC | rph | DR97_2706 | DR97_2705 | Hypothetical protein; YicC family protein | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | 0.697 |
| gmk | DR97_2704 | DR97_2707 | DR97_2704 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | annotation not available | 0.408 |
| gmk | YicC | DR97_2707 | DR97_2706 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | Hypothetical protein; YicC family protein | 0.810 |
| gmk | rph | DR97_2707 | DR97_2705 | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | 0.794 |
| queF | DR97_2704 | DR97_5137 | DR97_2704 | 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) | annotation not available | 0.497 |
| rph | DR97_2704 | DR97_2705 | DR97_2704 | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | annotation not available | 0.794 |
| rph | YicC | DR97_2705 | DR97_2706 | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | Hypothetical protein; YicC family protein | 0.697 |
| rph | gmk | DR97_2705 | DR97_2707 | Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP | 0.794 |
