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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_2711,4-dihydroxy-2-naphthoyl-CoA hydrolase; Belongs to the thioesterase PaaI family (145 aa)    
Predicted Functional Partners:
DR97_272
annotation not available
     
 0.707
DR97_270
annotation not available
       0.663
DR97_274
Hypothetical protein; DUF4389 domain-containing protein
       0.621
gpsA
Nad(p)h-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family
       0.616
DR97_269
annotation not available
       0.565
DR97_2747
annotation not available
     
 0.552
sixA
Putative phosphohistidine phosphatase; sixA: phosphohistidine phosphatase SixA
       0.548
ybgC
thio_ybgC: tol-pal system-associated acyl-CoA thioesterase
  
  
 0.524
tesB
tesB: acyl-CoA thioesterase II
   
  
 0.518
pchA
Salicylate biosynthesis isochorismate synthase; Involved in the conversion of chorismate to salicylate
 
  
 0.452
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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