Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_1334 | gor | DR97_1334 | DR97_5822 | Thioredoxin: thioredoxin | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | 0.641 |
DR97_1334 | oxyR | DR97_1334 | DR97_2715 | Thioredoxin: thioredoxin | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.526 |
DR97_2713 | DR97_2714 | DR97_2713 | DR97_2714 | annotation not available | annotation not available | 0.898 |
DR97_2713 | DR97_2717 | DR97_2713 | DR97_2717 | annotation not available | annotation not available | 0.447 |
DR97_2713 | oxyR | DR97_2713 | DR97_2715 | annotation not available | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.640 |
DR97_2713 | recG | DR97_2713 | DR97_2716 | annotation not available | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.682 |
DR97_2714 | DR97_2713 | DR97_2714 | DR97_2713 | annotation not available | annotation not available | 0.898 |
DR97_2714 | DR97_2717 | DR97_2714 | DR97_2717 | annotation not available | annotation not available | 0.505 |
DR97_2714 | oxyR | DR97_2714 | DR97_2715 | annotation not available | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.643 |
DR97_2714 | recG | DR97_2714 | DR97_2716 | annotation not available | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.679 |
DR97_2717 | DR97_2713 | DR97_2717 | DR97_2713 | annotation not available | annotation not available | 0.447 |
DR97_2717 | DR97_2714 | DR97_2717 | DR97_2714 | annotation not available | annotation not available | 0.505 |
DR97_2717 | oxyR | DR97_2717 | DR97_2715 | annotation not available | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.718 |
DR97_2717 | recG | DR97_2717 | DR97_2716 | annotation not available | Atp-dependent dna helicase recg; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA) | 0.718 |
ahpF | gor | DR97_3097 | DR97_5822 | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | 0.749 |
ahpF | oxyR | DR97_3097 | DR97_2715 | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.778 |
ahpF | sodB | DR97_3097 | DR97_1543 | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | Superoxide dismutase, fe-mn family; Destroys superoxide anion radicals which are normally produced within the cells and which are toxic to biological systems | 0.479 |
gor | DR97_1334 | DR97_5822 | DR97_1334 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Thioredoxin: thioredoxin | 0.641 |
gor | ahpF | DR97_5822 | DR97_3097 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Alkyl hydroperoxide reductase subunit f; Serves to protect the cell against DNA damage by alkyl hydroperoxides. It can use either NADH or NADPH as electron donor for direct reduction of redox dyes or of alkyl hydroperoxides when combined with the AhpC protein (By similarity) | 0.749 |
gor | oxyR | DR97_5822 | DR97_2715 | Pyridine nucleotide-disulfide oxidoreductase family protein; Maintains high levels of reduced glutathione in the cytosol | Lysr family transcriptional regulator, hydrogen peroxide-inducible genes activator; Belongs to the LysR transcriptional regulatory family | 0.625 |
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