Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2904 | glcC | DR97_2904 | DR97_2727 | annotation not available | annotation not available | 0.541 |
DR97_2904 | glcF | DR97_2904 | DR97_2724 | annotation not available | annotation not available | 0.418 |
EmrA | GlcG | DR97_2526 | DR97_2723 | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | Glc operon protein glcg; Uncharacterized protein | 0.683 |
EmrA | glcC | DR97_2526 | DR97_2727 | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | annotation not available | 0.676 |
EmrA | glcD | DR97_2526 | DR97_2726 | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | Putative FAD-linked oxidoreductase; glcD: glycolate oxidase, subunit GlcD | 0.683 |
EmrA | glcF | DR97_2526 | DR97_2724 | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | annotation not available | 0.851 |
GlcG | EmrA | DR97_2723 | DR97_2526 | Glc operon protein glcg; Uncharacterized protein | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | 0.683 |
GlcG | glcB | DR97_2723 | DR97_3450 | Glc operon protein glcg; Uncharacterized protein | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | 0.928 |
GlcG | glcC | DR97_2723 | DR97_2727 | Glc operon protein glcg; Uncharacterized protein | annotation not available | 0.968 |
GlcG | glcD | DR97_2723 | DR97_2726 | Glc operon protein glcg; Uncharacterized protein | Putative FAD-linked oxidoreductase; glcD: glycolate oxidase, subunit GlcD | 0.992 |
GlcG | glcE | DR97_2723 | DR97_2725 | Glc operon protein glcg; Uncharacterized protein | annotation not available | 0.986 |
GlcG | glcF | DR97_2723 | DR97_2724 | Glc operon protein glcg; Uncharacterized protein | annotation not available | 0.996 |
glcB | GlcG | DR97_3450 | DR97_2723 | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | Glc operon protein glcg; Uncharacterized protein | 0.928 |
glcB | glcC | DR97_3450 | DR97_2727 | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | annotation not available | 0.794 |
glcB | glcD | DR97_3450 | DR97_2726 | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | Putative FAD-linked oxidoreductase; glcD: glycolate oxidase, subunit GlcD | 0.955 |
glcB | glcE | DR97_3450 | DR97_2725 | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | annotation not available | 0.949 |
glcB | glcF | DR97_3450 | DR97_2724 | Malate synthase g; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA | annotation not available | 0.980 |
glcC | DR97_2904 | DR97_2727 | DR97_2904 | annotation not available | annotation not available | 0.541 |
glcC | EmrA | DR97_2727 | DR97_2526 | annotation not available | Membrane fusion protein, multidrug efflux system; Multidrug resistance protein A; RND_mfp: efflux transporter, RND family, MFP subunit | 0.676 |
glcC | GlcG | DR97_2727 | DR97_2723 | annotation not available | Glc operon protein glcg; Uncharacterized protein | 0.968 |
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