Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| birA | glcC | DR97_3627 | DR97_2727 | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon | annotation not available | 0.622 |
| emrA | glcC | DR97_2526 | DR97_2727 | Multidrug resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit | annotation not available | 0.560 |
| emrA | glcD | DR97_2526 | DR97_2726 | Multidrug resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit | Putative FAD-linked oxidoreductase; glcD- glycolate oxidase, subunit GlcD | 0.624 |
| emrA | glcF | DR97_2526 | DR97_2724 | Multidrug resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit | annotation not available | 0.853 |
| emrA | glcG | DR97_2526 | DR97_2723 | Multidrug resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit | Uncharacterized protein | 0.712 |
| glcB | glcC | DR97_3450 | DR97_2727 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | annotation not available | 0.588 |
| glcB | glcD | DR97_3450 | DR97_2726 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | Putative FAD-linked oxidoreductase; glcD- glycolate oxidase, subunit GlcD | 0.927 |
| glcB | glcE | DR97_3450 | DR97_2725 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | annotation not available | 0.945 |
| glcB | glcF | DR97_3450 | DR97_2724 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | annotation not available | 0.940 |
| glcB | glcG | DR97_3450 | DR97_2723 | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | Uncharacterized protein | 0.877 |
| glcC | birA | DR97_2727 | DR97_3627 | annotation not available | Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5’-adenylate (BirA-bio- 5’-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon | 0.622 |
| glcC | emrA | DR97_2727 | DR97_2526 | annotation not available | Multidrug resistance protein A; RND_mfp- efflux transporter, RND family, MFP subunit | 0.560 |
| glcC | glcB | DR97_2727 | DR97_3450 | annotation not available | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily | 0.588 |
| glcC | glcD | DR97_2727 | DR97_2726 | annotation not available | Putative FAD-linked oxidoreductase; glcD- glycolate oxidase, subunit GlcD | 0.857 |
| glcC | glcE | DR97_2727 | DR97_2725 | annotation not available | annotation not available | 0.772 |
| glcC | glcF | DR97_2727 | DR97_2724 | annotation not available | annotation not available | 0.962 |
| glcC | glcG | DR97_2727 | DR97_2723 | annotation not available | Uncharacterized protein | 0.967 |
| glcC | trpR | DR97_2727 | DR97_5107 | annotation not available | annotation not available | 0.550 |
| glcC | ubiA | DR97_2727 | DR97_2729 | annotation not available | 4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate | 0.573 |
| glcC | ubiC | DR97_2727 | DR97_2728 | annotation not available | Probable chorismate pyruvate-lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family | 0.665 |
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