Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2800 | DR97_2801 | DR97_2800 | DR97_2801 | Uncharacterized protein | annotation not available | 0.678 |
DR97_2800 | purE | DR97_2800 | DR97_2803 | Uncharacterized protein | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) | 0.421 |
DR97_2800 | purK | DR97_2800 | DR97_2802 | Uncharacterized protein | Phosphoribosylaminoimidazole carboxylase, atpase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) | 0.460 |
DR97_2801 | DR97_2800 | DR97_2801 | DR97_2800 | annotation not available | Uncharacterized protein | 0.678 |
DR97_2801 | DR97_3867 | DR97_2801 | DR97_3867 | annotation not available | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.731 |
DR97_2801 | TraG | DR97_2801 | DR97_5541 | annotation not available | Conjugal transfer protein; Uncharacterized protein | 0.672 |
DR97_2801 | ampG | DR97_2801 | DR97_1571 | annotation not available | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | 0.575 |
DR97_2801 | osmE | DR97_2801 | DR97_2227 | annotation not available | annotation not available | 0.516 |
DR97_2801 | purE | DR97_2801 | DR97_2803 | annotation not available | Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) | 0.655 |
DR97_2801 | purK | DR97_2801 | DR97_2802 | annotation not available | Phosphoribosylaminoimidazole carboxylase, atpase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) | 0.692 |
DR97_2801 | rlpA | DR97_2801 | DR97_1664 | annotation not available | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | 0.731 |
DR97_2801 | sltB1 | DR97_2801 | DR97_3866 | annotation not available | mltB: lytic murein transglycosylase B | 0.578 |
DR97_2801 | ygbF | DR97_2801 | DR97_963 | annotation not available | Tol-pal system protein ybgf; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division | 0.673 |
DR97_3867 | DR97_2801 | DR97_3867 | DR97_2801 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | annotation not available | 0.731 |
DR97_3867 | sltB1 | DR97_3867 | DR97_3866 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | mltB: lytic murein transglycosylase B | 0.988 |
DR97_3867 | ygbF | DR97_3867 | DR97_963 | Rare lipoa family protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides | Tol-pal system protein ybgf; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division | 0.874 |
TraG | DR97_2801 | DR97_5541 | DR97_2801 | Conjugal transfer protein; Uncharacterized protein | annotation not available | 0.672 |
ampG | DR97_2801 | DR97_1571 | DR97_2801 | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | annotation not available | 0.575 |
ampG | sltB1 | DR97_1571 | DR97_3866 | Mfs transporter, pat family, beta-lactamase induction signal transducer ampg; 2A0125: AmpG-like permease family protein | mltB: lytic murein transglycosylase B | 0.785 |
osmE | DR97_2801 | DR97_2227 | DR97_2801 | annotation not available | annotation not available | 0.516 |
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