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STRINGSTRING
mtr protein (Pseudomonas aeruginosa) - STRING interaction network
"mtr" - araaP: aromatic amino acid transport family protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mtraraaP- aromatic amino acid transport family protein (387 aa)    
Predicted Functional Partners:
cprA
annotation not available (385 aa)
       
 
  0.765
plsB
plsB- glycerol-3-phosphate O-acyltransferase; Belongs to the GPAT/DAPAT family (834 aa)
 
        0.646
kguE
annotation not available (260 aa)
           
  0.623
kguT
annotation not available (435 aa)
           
  0.550
yfiM
Putative secreted protein (106 aa)
   
          0.477
trpD
Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5’-phosphoribosyl)-anthranilate (PRA) (349 aa)
     
   
  0.459
sdaA3
Sda_mono- L-serine ammonia-lyase (458 aa)
   
   
  0.456
sdaA1
Sda_mono- L-serine ammonia-lyase (458 aa)
   
   
  0.456
oadA
oadA- oxaloacetate decarboxylase alpha subunit (607 aa)
              0.429
glpF
Glycerol uptake facilitator protein; MIP- MIP channel s family protein; Belongs to the MIP/aquaporin (TC 1.A.8) family (279 aa)
     
 
  0.427
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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