STRINGSTRING
yybR_2 protein (Pseudomonas aeruginosa) - STRING interaction network
"yybR_2" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yybR_2annotation not available (146 aa)    
Predicted Functional Partners:
ugpC
annotation not available (386 aa)
            
  0.717
srpR
annotation not available (197 aa)
    
   
  0.658
DR97_281
annotation not available (541 aa)
     
      0.591
DR97_442
annotation not available (403 aa)
 
        0.563
DR97_3288
annotation not available (262 aa)
   
        0.525
csgA
annotation not available (229 aa)
      
        0.520
ydjA_2
annotation not available (186 aa)
   
        0.482
DR97_4017
annotation not available (334 aa)
            
  0.463
preA
NAD-dependent dihydropyrimidine dehydrogenase subunit PreA; pyrD_sub1_fam- dihydroorotate dehydrogenase family domain protein (424 aa)
      
   
  0.461
DR97_5073
Terminase (119 aa)
      
        0.456
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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