STRINGSTRING
dctD3 protein (Pseudomonas aeruginosa) - STRING interaction network
"dctD3" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dctD3annotation not available (447 aa)    
Predicted Functional Partners:
mifS
annotation not available (588 aa)
  0.997
DR97_2533
annotation not available (599 aa)
  0.903
rpoN
RNA polymerase sigma-54 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (497 aa)
 
     
  0.890
dctA
C4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane (436 aa)
           
  0.860
dctA1
C4-dicarboxylate transport protein 1; Sodium-dicarboxylate symporter family protein; Belongs to the dicarboxylate/amino acid-cation symporter (DAACS) (TC 2.A.23) family (444 aa)
           
  0.860
dctD1
annotation not available (462 aa)
   
 
 
0.820
DR97_3759
annotation not available (1417 aa)
   
 
  0.784
DR97_3569
annotation not available (797 aa)
   
 
  0.714
bvgS
annotation not available (1212 aa)
   
 
  0.696
ntrB
annotation not available (358 aa)
 
  0.657
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
Server load: low (10%) [HD]