DR97_2892 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

Your Input:

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[Homology]

Score

DR97_2892

annotation not available (262 aa)

Predicted Functional Partners:

feoB

0.658

DR97_2891

0.627

selB

0.613

mifS

0.486

dctD3

0.460

DR97_332

0.437

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_2891	DR97_2892	DR97_2891	DR97_2892	annotation not available	annotation not available	0.627
DR97_2891	dctD3	DR97_2891	DR97_2889	annotation not available	annotation not available	0.604
DR97_2891	mifS	DR97_2891	DR97_2890	annotation not available	annotation not available	0.693
DR97_2892	DR97_2891	DR97_2892	DR97_2891	annotation not available	annotation not available	0.627
DR97_2892	DR97_332	DR97_2892	DR97_332	annotation not available	annotation not available	0.437
DR97_2892	dctD3	DR97_2892	DR97_2889	annotation not available	annotation not available	0.460
DR97_2892	feoB	DR97_2892	DR97_1534	annotation not available	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system	0.658
DR97_2892	mifS	DR97_2892	DR97_2890	annotation not available	annotation not available	0.486
DR97_2892	selB	DR97_2892	DR97_2154	annotation not available	selB- selenocysteine-specific translation elongation factor	0.613
DR97_332	DR97_2892	DR97_332	DR97_2892	annotation not available	annotation not available	0.437
dctD3	DR97_2891	DR97_2889	DR97_2891	annotation not available	annotation not available	0.604
dctD3	DR97_2892	DR97_2889	DR97_2892	annotation not available	annotation not available	0.460
dctD3	mifS	DR97_2889	DR97_2890	annotation not available	annotation not available	0.997
feoB	DR97_2892	DR97_1534	DR97_2892	Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system	annotation not available	0.658
mifS	DR97_2891	DR97_2890	DR97_2891	annotation not available	annotation not available	0.693
mifS	DR97_2892	DR97_2890	DR97_2892	annotation not available	annotation not available	0.486
mifS	dctD3	DR97_2890	DR97_2889	annotation not available	annotation not available	0.997
selB	DR97_2892	DR97_2154	DR97_2892	selB- selenocysteine-specific translation elongation factor	annotation not available	0.613

Network

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Coexpression

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