Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Aminotransferase | DR97_2900 | DR97_2902 | DR97_2900 | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | annotation not available | 0.656 |
Aminotransferase | DR97_2901 | DR97_2902 | DR97_2901 | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.931 |
Aminotransferase | DR97_2903 | DR97_2902 | DR97_2903 | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | annotation not available | 0.753 |
Aminotransferase | DR97_2904 | DR97_2902 | DR97_2904 | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | annotation not available | 0.652 |
DR97_2426 | DR97_2904 | DR97_2426 | DR97_2904 | Rna methyltransferase, rsme family protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit | annotation not available | 0.485 |
DR97_2900 | Aminotransferase | DR97_2900 | DR97_2902 | annotation not available | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | 0.656 |
DR97_2900 | DR97_2901 | DR97_2900 | DR97_2901 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.604 |
DR97_2900 | DR97_2903 | DR97_2900 | DR97_2903 | annotation not available | annotation not available | 0.557 |
DR97_2900 | DR97_2904 | DR97_2900 | DR97_2904 | annotation not available | annotation not available | 0.437 |
DR97_2901 | Aminotransferase | DR97_2901 | DR97_2902 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | 0.931 |
DR97_2901 | DR97_2900 | DR97_2901 | DR97_2900 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.604 |
DR97_2901 | DR97_2903 | DR97_2901 | DR97_2903 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.615 |
DR97_2901 | DR97_2904 | DR97_2901 | DR97_2904 | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | annotation not available | 0.461 |
DR97_2903 | Aminotransferase | DR97_2903 | DR97_2902 | annotation not available | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | 0.753 |
DR97_2903 | DR97_2900 | DR97_2903 | DR97_2900 | annotation not available | annotation not available | 0.557 |
DR97_2903 | DR97_2901 | DR97_2903 | DR97_2901 | annotation not available | Glutamine synthetase, catalytic domain protein; Belongs to the glutamine synthetase family | 0.615 |
DR97_2903 | DR97_2904 | DR97_2903 | DR97_2904 | annotation not available | annotation not available | 0.735 |
DR97_2904 | Aminotransferase | DR97_2904 | DR97_2902 | annotation not available | Aminotransferase class-iii family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family | 0.652 |
DR97_2904 | DR97_2426 | DR97_2904 | DR97_2426 | annotation not available | Rna methyltransferase, rsme family protein; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit | 0.485 |
DR97_2904 | DR97_2900 | DR97_2904 | DR97_2900 | annotation not available | annotation not available | 0.437 |
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