Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but resolution at 400 dpi
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as simple tabular text output:
TSV: tab separated values - can be opened in Excel
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and annotated functions of the network proteins
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_1038 | DR97_2915 | DR97_1038 | DR97_2915 | Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding | dksA- RNA polymerase-binding protein DksA | 0.809 |
| DR97_1038 | fis | DR97_1038 | DR97_2204 | Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding | DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters | 0.563 |
| DR97_1038 | relA | DR97_1038 | DR97_1005 | Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance | 0.796 |
| DR97_1038 | rpoS | DR97_1038 | DR97_4317 | Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding | rpoS_proteo- RNA polymerase sigma factor RpoS | 0.963 |
| DR97_2913 | DR97_2914 | DR97_2913 | DR97_2914 | Uncharacterized protein | annotation not available | 0.992 |
| DR97_2913 | DR97_2915 | DR97_2913 | DR97_2915 | Uncharacterized protein | dksA- RNA polymerase-binding protein DksA | 0.964 |
| DR97_2913 | DR97_2917 | DR97_2913 | DR97_2917 | Uncharacterized protein | annotation not available | 0.767 |
| DR97_2914 | DR97_2913 | DR97_2914 | DR97_2913 | annotation not available | Uncharacterized protein | 0.992 |
| DR97_2914 | DR97_2915 | DR97_2914 | DR97_2915 | annotation not available | dksA- RNA polymerase-binding protein DksA | 0.960 |
| DR97_2914 | DR97_2917 | DR97_2914 | DR97_2917 | annotation not available | annotation not available | 0.750 |
| DR97_2915 | DR97_1038 | DR97_2915 | DR97_1038 | dksA- RNA polymerase-binding protein DksA | Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding | 0.809 |
| DR97_2915 | DR97_2913 | DR97_2915 | DR97_2913 | dksA- RNA polymerase-binding protein DksA | Uncharacterized protein | 0.964 |
| DR97_2915 | DR97_2914 | DR97_2915 | DR97_2914 | dksA- RNA polymerase-binding protein DksA | annotation not available | 0.960 |
| DR97_2915 | DR97_2917 | DR97_2915 | DR97_2917 | dksA- RNA polymerase-binding protein DksA | annotation not available | 0.754 |
| DR97_2915 | DR97_5381 | DR97_2915 | DR97_5381 | dksA- RNA polymerase-binding protein DksA | csrA- carbon storage regulator | 0.822 |
| DR97_2915 | fis | DR97_2915 | DR97_2204 | dksA- RNA polymerase-binding protein DksA | DNA-binding protein Fis; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters | 0.719 |
| DR97_2915 | greB | DR97_2915 | DR97_5082 | dksA- RNA polymerase-binding protein DksA | Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3’terminus. GreB releases sequences of up to 9 nucleotides in length | 0.793 |
| DR97_2915 | relA | DR97_2915 | DR97_1005 | dksA- RNA polymerase-binding protein DksA | GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3’-diphosphate 5-’ diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance | 0.864 |
| DR97_2915 | rpoS | DR97_2915 | DR97_4317 | dksA- RNA polymerase-binding protein DksA | rpoS_proteo- RNA polymerase sigma factor RpoS | 0.826 |
| DR97_2915 | rpoZ | DR97_2915 | DR97_2708 | dksA- RNA polymerase-binding protein DksA | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits | 0.827 |
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