Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2275 | DR97_2930 | DR97_2275 | DR97_2930 | annotation not available | annotation not available | 0.494 |
| DR97_2930 | DR97_2275 | DR97_2930 | DR97_2275 | annotation not available | annotation not available | 0.494 |
| DR97_2930 | NlpD | DR97_2930 | DR97_4316 | annotation not available | annotation not available | 0.490 |
| DR97_2930 | atpC | DR97_2930 | DR97_2932 | annotation not available | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | 0.546 |
| DR97_2930 | atpD | DR97_2930 | DR97_2933 | annotation not available | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.472 |
| DR97_2930 | atpG | DR97_2930 | DR97_2934 | annotation not available | F-type h+-transporting atpase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex | 0.429 |
| DR97_2930 | glmR | DR97_2930 | DR97_2929 | annotation not available | GlmR transcriptional regulator; deoR C terminal sensor domain protein | 0.638 |
| DR97_2930 | glmS | DR97_2930 | DR97_2928 | annotation not available | Glutamine---fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source | 0.617 |
| DR97_2930 | glmU | DR97_2930 | DR97_2931 | annotation not available | Bifunctional udp-n-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate n-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.828 |
| NlpD | DR97_2930 | DR97_4316 | DR97_2930 | annotation not available | annotation not available | 0.490 |
| atpC | DR97_2930 | DR97_2932 | DR97_2930 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | annotation not available | 0.546 |
| atpC | atpD | DR97_2932 | DR97_2933 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | 0.999 |
| atpC | atpG | DR97_2932 | DR97_2934 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | F-type h+-transporting atpase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex | 0.999 |
| atpC | glmR | DR97_2932 | DR97_2929 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | GlmR transcriptional regulator; deoR C terminal sensor domain protein | 0.439 |
| atpC | glmS | DR97_2932 | DR97_2928 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | Glutamine---fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source | 0.607 |
| atpC | glmU | DR97_2932 | DR97_2931 | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | Bifunctional udp-n-acetylglucosamine pyrophosphorylase / glucosamine-1-phosphate n-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain | 0.702 |
| atpD | DR97_2930 | DR97_2933 | DR97_2930 | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | annotation not available | 0.472 |
| atpD | atpC | DR97_2933 | DR97_2932 | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | F-type h+-transporting atpase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane | 0.999 |
| atpD | atpG | DR97_2933 | DR97_2934 | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | F-type h+-transporting atpase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex | 0.999 |
| atpD | glmS | DR97_2933 | DR97_2928 | F-type h+/na+-transporting atpase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits | Glutamine---fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source | 0.629 |
page 1 of 3
