Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DR97_2980 | plcB | DR97_2980 | DR97_2979 | annotation not available | annotation not available | 0.892 |
| aprA | eta | DR97_688 | DR97_786 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | 0.852 |
| aprA | exoS | DR97_688 | DR97_4025 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | annotation not available | 0.588 |
| aprA | exoT | DR97_688 | DR97_3001 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | annotation not available | 0.851 |
| aprA | lasA | DR97_688 | DR97_4 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | 0.865 |
| aprA | lasB | DR97_688 | DR97_4154 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | Pseudolysin; Cleaves host elastin, collagen, IgG, and several complement components as well as endogenous pro-aminopeptidase . Autocatalyses processing of its pro-peptide Processes the pro-peptide of pro-chitin-binding protein (cbpD) . Involved in the pathogenesis of P.aeruginosa infections | 0.904 |
| aprA | plcB | DR97_688 | DR97_2979 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | annotation not available | 0.682 |
| aprA | plcH | DR97_688 | DR97_1100 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | Phospholipase c, phosphocholine-specific; Hydrolyzes sphingomyelin in addition to phosphatidylcholine | 0.849 |
| aprA | plcN | DR97_688 | DR97_4608 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine | 0.848 |
| eta | aprA | DR97_786 | DR97_688 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | 0.852 |
| eta | exoS | DR97_786 | DR97_4025 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | annotation not available | 0.854 |
| eta | exoT | DR97_786 | DR97_3001 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | annotation not available | 0.854 |
| eta | lasA | DR97_786 | DR97_4 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | 0.854 |
| eta | lasB | DR97_786 | DR97_4154 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | Pseudolysin; Cleaves host elastin, collagen, IgG, and several complement components as well as endogenous pro-aminopeptidase . Autocatalyses processing of its pro-peptide Processes the pro-peptide of pro-chitin-binding protein (cbpD) . Involved in the pathogenesis of P.aeruginosa infections | 0.854 |
| eta | plcB | DR97_786 | DR97_2979 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | annotation not available | 0.854 |
| eta | plcH | DR97_786 | DR97_1100 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | Phospholipase c, phosphocholine-specific; Hydrolyzes sphingomyelin in addition to phosphatidylcholine | 0.854 |
| eta | plcN | DR97_786 | DR97_4608 | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | Phospholipase c, phosphocholine-specific; Hydrolyzes phosphatidylserine as well as phosphatidylcholine | 0.853 |
| exoS | aprA | DR97_4025 | DR97_688 | annotation not available | Alkaline metalloproteinase precursor; Belongs to the peptidase M10B family | 0.588 |
| exoS | eta | DR97_4025 | DR97_786 | annotation not available | Exotoxin a precursor; An NAD-dependent ADP-ribosyltransferase (ADPRT). Catalyzes the transfer of the ADP ribosyl moiety of oxidized NAD (NAD(+)) onto eukaryotic elongation factor 2 (eEF-2) thus arresting protein synthesis. Has an LD(50) of 65 ng/ml against the human lung epithelial cell line C38 | 0.854 |
| exoS | lasA | DR97_4025 | DR97_4 | annotation not available | Lasa protease precursor; Involved in proteolysis and elastolysis (degradation of the host protein elastin). Has staphylolytic activity (degrades pentaglycine cross-links in cell wall peptidogylcan), preferring Gly- Gly-|-X substrates where X is Ala or Gly . Enhances the elastolytic but not proteolytic activity of elastase (lasB) and elastolytic activity of other proteases . Degradation of host elastin is likely to contribute to the pathogenicity of P.aeruginosa. While either His-317 or His-356 can abstract a proton in the hydrolysis reaction, the same residue performs both functions in [...] | 0.572 |
page 1 of 4
