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DR97_2983 protein (Pseudomonas aeruginosa) - STRING interaction network
"DR97_2983" - Uncharacterized protein in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR97_2983Uncharacterized protein; ABC_choline_bnd- choline ABC transporter, periplasmic binding family protein (307 aa)    
Predicted Functional Partners:
choW
Glycine betaine transport system permease protein OpuAB; ABC_choXWV_perm- choline ABC transporter, permease protein (279 aa)
 
  0.997
choV
ABC_choXWV_ATP- choline ABC transporter, ATP-binding protein (392 aa)
  0.995
opuAB1
annotation not available (283 aa)
 
  0.987
opuAA
proV- glycine betaine/L-proline transport ATP binding subunit (276 aa)
  0.975
betC
Chol_sulfatase- choline-sulfatase (503 aa)
 
        0.881
DR97_2982
annotation not available (517 aa)
 
          0.868
DR97_2985
annotation not available (299 aa)
 
        0.756
gbt
annotation not available (654 aa)
           
  0.702
betI
HTH-type transcriptional regulator BetI; Repressor involved in choline regulation of the bet genes (197 aa)
 
     
  0.660
opuCB
annotation not available (220 aa)
 
     
  0.613
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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