STRINGSTRING
dmlR_34 protein (Pseudomonas aeruginosa) - STRING interaction network
"dmlR_34" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dmlR_34annotation not available (306 aa)    
Predicted Functional Partners:
DR97_3015
Uncharacterized protein (234 aa)
 
        0.812
DR97_3014
annotation not available (295 aa)
 
        0.797
kptA
Probable RNA 2’-phosphotransferase; Removes the 2’-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP- ribose 1’’-2’’-cyclic phosphate (APPR>P). May function as an ADP- ribosylase (182 aa)
   
        0.685
DR97_3012
Uncharacterized protein (168 aa)
              0.643
DR97_6049
annotation not available (306 aa)
   
          0.640
DR97_5011
annotation not available (308 aa)
   
          0.562
sdsB3
annotation not available (304 aa)
   
        0.538
DR97_3693
Transporter; sider_RhtX_FptX- siderophore transporter, RhtX/FptX family protein (414 aa)
   
      0.525
DR97_1409
annotation not available (284 aa)
   
        0.459
yiaV
Inner membrane protein YiaV; RND_mfp- efflux transporter, RND family, MFP subunit (352 aa)
     
   
  0.443
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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