STRINGSTRING
ppkA protein (Pseudomonas aeruginosa) - STRING interaction network
"ppkA" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppkAannotation not available (1032 aa)    
Predicted Functional Partners:
pppA
annotation not available (242 aa)
 
  0.998
DR97_3038
annotation not available (493 aa)
 
 
  0.990
DR97_3029
annotation not available (399 aa)
 
 
  0.984
DR97_3033
Uncharacterized protein (226 aa)
 
   
  0.982
DR97_3035
Uncharacterized protein; type_VI_ompA- type VI secretion system OmpA/MotB family protein (449 aa)
 
   
  0.979
DR97_3034
annotation not available (1176 aa)
 
   
  0.977
DR97_3028
annotation not available (570 aa)
 
        0.975
clpV1-1
VI_ClpV1- type VI secretion ATPase, ClpV1 family (902 aa)
 
 
  0.973
vgrG1
VgrG1; vgr_GE- Rhs element Vgr family protein (646 aa)
 
   
  0.962
DR97_3030
annotation not available (239 aa)
 
        0.957
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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