Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3028 | DR97_3029 | DR97_3028 | DR97_3029 | annotation not available | annotation not available | 0.975 |
DR97_3028 | DR97_3030 | DR97_3028 | DR97_3030 | annotation not available | annotation not available | 0.960 |
DR97_3028 | DR97_3033 | DR97_3028 | DR97_3033 | annotation not available | Type vi secretion system protein impm; Uncharacterized protein | 0.972 |
DR97_3028 | DR97_3035 | DR97_3028 | DR97_3035 | annotation not available | Uncharacterized protein; type_VI_ompA: type VI secretion system OmpA/MotB family protein | 0.959 |
DR97_3028 | clpV1 | DR97_3028 | DR97_3047 | annotation not available | Type vi secretion atpase, clpv1 family; Required for secretion of hcp1 probably by providing the energy source for its translocation | 0.493 |
DR97_3028 | fha1 | DR97_3028 | DR97_3038 | annotation not available | annotation not available | 0.935 |
DR97_3028 | icmF1 | DR97_3028 | DR97_3034 | annotation not available | annotation not available | 0.947 |
DR97_3028 | ppkA | DR97_3028 | DR97_3031 | annotation not available | annotation not available | 0.976 |
DR97_3028 | pppA | DR97_3028 | DR97_3032 | annotation not available | annotation not available | 0.918 |
DR97_3028 | vgrG1a | DR97_3028 | DR97_3048 | annotation not available | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.467 |
DR97_3029 | DR97_3028 | DR97_3029 | DR97_3028 | annotation not available | annotation not available | 0.975 |
DR97_3029 | DR97_3030 | DR97_3029 | DR97_3030 | annotation not available | annotation not available | 0.988 |
DR97_3029 | DR97_3033 | DR97_3029 | DR97_3033 | annotation not available | Type vi secretion system protein impm; Uncharacterized protein | 0.983 |
DR97_3029 | DR97_3035 | DR97_3029 | DR97_3035 | annotation not available | Uncharacterized protein; type_VI_ompA: type VI secretion system OmpA/MotB family protein | 0.966 |
DR97_3029 | clpV1 | DR97_3029 | DR97_3047 | annotation not available | Type vi secretion atpase, clpv1 family; Required for secretion of hcp1 probably by providing the energy source for its translocation | 0.498 |
DR97_3029 | fha1 | DR97_3029 | DR97_3038 | annotation not available | annotation not available | 0.915 |
DR97_3029 | icmF1 | DR97_3029 | DR97_3034 | annotation not available | annotation not available | 0.960 |
DR97_3029 | ppkA | DR97_3029 | DR97_3031 | annotation not available | annotation not available | 0.984 |
DR97_3029 | pppA | DR97_3029 | DR97_3032 | annotation not available | annotation not available | 0.949 |
DR97_3029 | vgrG1a | DR97_3029 | DR97_3048 | annotation not available | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.519 |
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