ppkA protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurence

Coexpression

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[Homology]

Score

ppkA

annotation not available (1032 aa)

Predicted Functional Partners:

pppA

0.998

DR97_3038

0.990

DR97_3029

0.984

DR97_3033

0.982

DR97_3035

0.979

DR97_3034

0.977

DR97_3028

0.975

clpV1-1

0.973

vgrG1

0.962

DR97_3030

0.957

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_3028	DR97_3029	DR97_3028	DR97_3029	annotation not available	annotation not available	0.975
DR97_3028	DR97_3030	DR97_3028	DR97_3030	annotation not available	annotation not available	0.961
DR97_3028	DR97_3033	DR97_3028	DR97_3033	annotation not available	Uncharacterized protein	0.972
DR97_3028	DR97_3034	DR97_3028	DR97_3034	annotation not available	annotation not available	0.947
DR97_3028	DR97_3035	DR97_3028	DR97_3035	annotation not available	Uncharacterized protein; type_VI_ompA: type VI secretion system OmpA/MotB family protein	0.959
DR97_3028	DR97_3038	DR97_3028	DR97_3038	annotation not available	annotation not available	0.933
DR97_3028	clpV1-1	DR97_3028	DR97_3047	annotation not available	VI_ClpV1: type VI secretion ATPase, ClpV1 family	0.493
DR97_3028	ppkA	DR97_3028	DR97_3031	annotation not available	annotation not available	0.975
DR97_3028	pppA	DR97_3028	DR97_3032	annotation not available	annotation not available	0.918
DR97_3028	vgrG1	DR97_3028	DR97_3048	annotation not available	VgrG1; vgr_GE: Rhs element Vgr family protein	0.466
DR97_3029	DR97_3028	DR97_3029	DR97_3028	annotation not available	annotation not available	0.975
DR97_3029	DR97_3030	DR97_3029	DR97_3030	annotation not available	annotation not available	0.990
DR97_3029	DR97_3033	DR97_3029	DR97_3033	annotation not available	Uncharacterized protein	0.983
DR97_3029	DR97_3034	DR97_3029	DR97_3034	annotation not available	annotation not available	0.960
DR97_3029	DR97_3035	DR97_3029	DR97_3035	annotation not available	Uncharacterized protein; type_VI_ompA: type VI secretion system OmpA/MotB family protein	0.966
DR97_3029	DR97_3038	DR97_3029	DR97_3038	annotation not available	annotation not available	0.915
DR97_3029	clpV1-1	DR97_3029	DR97_3047	annotation not available	VI_ClpV1: type VI secretion ATPase, ClpV1 family	0.516
DR97_3029	ppkA	DR97_3029	DR97_3031	annotation not available	annotation not available	0.984
DR97_3029	pppA	DR97_3029	DR97_3032	annotation not available	annotation not available	0.949
DR97_3029	vgrG1	DR97_3029	DR97_3048	annotation not available	VgrG1; vgr_GE: Rhs element Vgr family protein	0.519

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