Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_3040 | DR97_3041 | DR97_3040 | DR97_3041 | Type VI secretion system-associated protein | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | 0.998 |
DR97_3040 | DR97_3043 | DR97_3040 | DR97_3043 | Type VI secretion system-associated protein | annotation not available | 0.977 |
DR97_3040 | DR97_3044 | DR97_3040 | DR97_3044 | Type VI secretion system-associated protein | annotation not available | 0.891 |
DR97_3040 | DR97_3046 | DR97_3040 | DR97_3046 | Type VI secretion system-associated protein | Type vi secretion system protein imph; Uncharacterized protein | 0.890 |
DR97_3040 | DR97_6061 | DR97_3040 | DR97_6061 | Type VI secretion system-associated protein | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.645 |
DR97_3040 | clpV1 | DR97_3040 | DR97_3047 | Type VI secretion system-associated protein | Type vi secretion atpase, clpv1 family; Required for secretion of hcp1 probably by providing the energy source for its translocation | 0.878 |
DR97_3040 | fha1 | DR97_3040 | DR97_3038 | Type VI secretion system-associated protein | annotation not available | 0.864 |
DR97_3040 | hcp1 | DR97_3040 | DR97_3042 | Type VI secretion system-associated protein | Type vi secretion system secreted protein hcp; Required for assembly of the protein secretion apparatus HSI- I. Actively secreted during chronic infection of cystic fibrosis patients | 0.961 |
DR97_3040 | ppkA | DR97_3040 | DR97_3031 | Type VI secretion system-associated protein | annotation not available | 0.490 |
DR97_3040 | vgrG1a | DR97_3040 | DR97_3048 | Type VI secretion system-associated protein | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.870 |
DR97_3041 | DR97_3040 | DR97_3041 | DR97_3040 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Type VI secretion system-associated protein | 0.998 |
DR97_3041 | DR97_3043 | DR97_3041 | DR97_3043 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | annotation not available | 0.867 |
DR97_3041 | DR97_3044 | DR97_3041 | DR97_3044 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | annotation not available | 0.898 |
DR97_3041 | DR97_3046 | DR97_3041 | DR97_3046 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Type vi secretion system protein imph; Uncharacterized protein | 0.894 |
DR97_3041 | DR97_6061 | DR97_3041 | DR97_6061 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Type vi secretion atpase, clpv1 family; Belongs to the ClpA/ClpB family | 0.677 |
DR97_3041 | clpV1 | DR97_3041 | DR97_3047 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Type vi secretion atpase, clpv1 family; Required for secretion of hcp1 probably by providing the energy source for its translocation | 0.902 |
DR97_3041 | fha1 | DR97_3041 | DR97_3038 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | annotation not available | 0.851 |
DR97_3041 | hcp1 | DR97_3041 | DR97_3042 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Type vi secretion system secreted protein hcp; Required for assembly of the protein secretion apparatus HSI- I. Actively secreted during chronic infection of cystic fibrosis patients | 0.972 |
DR97_3041 | ppkA | DR97_3041 | DR97_3031 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | annotation not available | 0.416 |
DR97_3041 | vgrG1a | DR97_3041 | DR97_3048 | Type vi secretion system protein impc; Type VI secretion protein, EvpB/ family | Rhs element vgr family protein; Part of the H1 type VI secretion system (H1-T6SS) specialized secretion system, which delivers several virulence factors in both prokaryotic and eukaryotic cells during infection Forms the spike at the tip of the elongating tube formed by haemolysin co-regulated protein 1/Hcp1 . Allows the delivery of the Tse6 toxin to target cells where it exerts its toxicity | 0.882 |
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