rhsB protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurence

Coexpression

Experiments

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[Homology]

Score

rhsB

annotation not available (430 aa)

Predicted Functional Partners:

DR97_3049

0.977

DR97_3051

0.967

vgrG1

0.902

rhs

0.882

DR97_3058

0.828

DR97_3055

0.813

DR97_3054

0.801

DR97_3633

0.800

tufA3

0.800

DR97_3053

0.789

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_3049	DR97_3051	DR97_3049	DR97_3051	Uncharacterized protein	Uncharacterized protein	0.820
DR97_3049	DR97_3053	DR97_3049	DR97_3053	Uncharacterized protein	Uncharacterized protein	0.424
DR97_3049	DR97_3054	DR97_3049	DR97_3054	Uncharacterized protein	Uncharacterized protein	0.406
DR97_3049	DR97_3055	DR97_3049	DR97_3055	Uncharacterized protein	Beta-ketoacyl synthase, N-terminal domain protein	0.402
DR97_3049	rhsB	DR97_3049	DR97_3050	Uncharacterized protein	annotation not available	0.977
DR97_3051	DR97_3049	DR97_3051	DR97_3049	Uncharacterized protein	Uncharacterized protein	0.820
DR97_3051	DR97_3053	DR97_3051	DR97_3053	Uncharacterized protein	Uncharacterized protein	0.795
DR97_3051	DR97_3054	DR97_3051	DR97_3054	Uncharacterized protein	Uncharacterized protein	0.788
DR97_3051	DR97_3055	DR97_3051	DR97_3055	Uncharacterized protein	Beta-ketoacyl synthase, N-terminal domain protein	0.826
DR97_3051	DR97_3058	DR97_3051	DR97_3058	Uncharacterized protein	Uncharacterized protein	0.829
DR97_3051	rhsB	DR97_3051	DR97_3050	Uncharacterized protein	annotation not available	0.967
DR97_3053	DR97_3049	DR97_3053	DR97_3049	Uncharacterized protein	Uncharacterized protein	0.424
DR97_3053	DR97_3051	DR97_3053	DR97_3051	Uncharacterized protein	Uncharacterized protein	0.795
DR97_3053	DR97_3054	DR97_3053	DR97_3054	Uncharacterized protein	Uncharacterized protein	0.979
DR97_3053	DR97_3055	DR97_3053	DR97_3055	Uncharacterized protein	Beta-ketoacyl synthase, N-terminal domain protein	0.976
DR97_3053	DR97_3058	DR97_3053	DR97_3058	Uncharacterized protein	Uncharacterized protein	0.957
DR97_3053	rhsB	DR97_3053	DR97_3050	Uncharacterized protein	annotation not available	0.789
DR97_3053	vgrG1	DR97_3053	DR97_3048	Uncharacterized protein	VgrG1; vgr_GE: Rhs element Vgr family protein	0.601
DR97_3054	DR97_3049	DR97_3054	DR97_3049	Uncharacterized protein	Uncharacterized protein	0.406
DR97_3054	DR97_3051	DR97_3054	DR97_3051	Uncharacterized protein	Uncharacterized protein	0.788

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