Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
CoxG | CtaA | DR97_3064 | DR97_3069 | annotation not available | annotation not available | 0.980 |
CoxG | DR97_3067 | DR97_3064 | DR97_3067 | annotation not available | annotation not available | 0.937 |
CoxG | DR97_3068 | DR97_3064 | DR97_3068 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.818 |
CoxG | coIII | DR97_3064 | DR97_3065 | annotation not available | annotation not available | 0.982 |
CoxG | coxB | DR97_3064 | DR97_3062 | annotation not available | Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) | 0.992 |
CoxG | ctaD | DR97_3064 | DR97_3063 | annotation not available | Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B | 0.994 |
CoxG | cyoE1 | DR97_3064 | DR97_3070 | annotation not available | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | 0.984 |
CoxG | cyoE2 | DR97_3064 | DR97_473 | annotation not available | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | 0.871 |
CoxG | senC | DR97_3064 | DR97_3071 | annotation not available | annotation not available | 0.696 |
CtaA | CoxG | DR97_3069 | DR97_3064 | annotation not available | annotation not available | 0.980 |
CtaA | DR97_1607 | DR97_3069 | DR97_1607 | annotation not available | annotation not available | 0.879 |
CtaA | DR97_3067 | DR97_3069 | DR97_3067 | annotation not available | annotation not available | 0.980 |
CtaA | DR97_3068 | DR97_3069 | DR97_3068 | annotation not available | Hypothetical protein; Uncharacterized protein | 0.981 |
CtaA | coIII | DR97_3069 | DR97_3065 | annotation not available | annotation not available | 0.965 |
CtaA | coxB | DR97_3069 | DR97_3062 | annotation not available | Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) | 0.960 |
CtaA | ctaD | DR97_3069 | DR97_3063 | annotation not available | Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B | 0.970 |
CtaA | cyoE1 | DR97_3069 | DR97_3070 | annotation not available | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | 0.999 |
CtaA | cyoE2 | DR97_3069 | DR97_473 | annotation not available | Protoheme ix farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group | 0.982 |
CtaA | senC | DR97_3069 | DR97_3071 | annotation not available | annotation not available | 0.902 |
DR97_1607 | CtaA | DR97_1607 | DR97_3069 | annotation not available | annotation not available | 0.879 |
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