Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DR97_2116 | DR97_3077 | DR97_2116 | DR97_3077 | D-lactate dehydrogenase; Ferredoxin; FAD linked oxidase, C-terminal domain protein | annotation not available | 0.423 |
DR97_2904 | DR97_3077 | DR97_2904 | DR97_3077 | annotation not available | annotation not available | 0.655 |
DR97_2904 | DR97_502 | DR97_2904 | DR97_502 | annotation not available | annotation not available | 0.455 |
DR97_2904 | DR97_5151 | DR97_2904 | DR97_5151 | annotation not available | annotation not available | 0.700 |
DR97_3077 | DR97_2116 | DR97_3077 | DR97_2116 | annotation not available | D-lactate dehydrogenase; Ferredoxin; FAD linked oxidase, C-terminal domain protein | 0.423 |
DR97_3077 | DR97_2904 | DR97_3077 | DR97_2904 | annotation not available | annotation not available | 0.655 |
DR97_3077 | DR97_3078 | DR97_3077 | DR97_3078 | annotation not available | annotation not available | 0.819 |
DR97_3077 | DR97_3193 | DR97_3077 | DR97_3193 | annotation not available | annotation not available | 0.546 |
DR97_3077 | DR97_410 | DR97_3077 | DR97_410 | annotation not available | annotation not available | 0.400 |
DR97_3077 | DR97_502 | DR97_3077 | DR97_502 | annotation not available | annotation not available | 0.442 |
DR97_3077 | DR97_5151 | DR97_3077 | DR97_5151 | annotation not available | annotation not available | 0.576 |
DR97_3077 | VanR | DR97_3077 | DR97_2256 | annotation not available | annotation not available | 0.414 |
DR97_3077 | dctA1 | DR97_3077 | DR97_3076 | annotation not available | Aerobic c4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane | 0.707 |
DR97_3077 | murU | DR97_3077 | DR97_3566 | annotation not available | N-acetyl-alpha-d-muramate 1-phosphate uridylyltransferase; Catalyzes the formation of UDP-N-acetylmuramate (UDP-MurNAc), a crucial precursor of the bacterial peptidoglycan cell wall, from UTP and MurNAc-alpha-1P (By similarity). Is involved in peptidoglycan recycling as part of a cell wall recycling pathway that bypasses de novo biosynthesis of the peptidoglycan precursor UDP-MurNAc . Plays a role in intrinsic resistance to fosfomycin, which targets the de novo synthesis of UDP-MurNAc | 0.408 |
DR97_3078 | DR97_3077 | DR97_3078 | DR97_3077 | annotation not available | annotation not available | 0.819 |
DR97_3078 | dctA1 | DR97_3078 | DR97_3076 | annotation not available | Aerobic c4-dicarboxylate transport protein; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate from the periplasm across the membrane | 0.539 |
DR97_3193 | DR97_3077 | DR97_3193 | DR97_3077 | annotation not available | annotation not available | 0.546 |
DR97_410 | DR97_3077 | DR97_410 | DR97_3077 | annotation not available | annotation not available | 0.400 |
DR97_502 | DR97_2904 | DR97_502 | DR97_2904 | annotation not available | annotation not available | 0.455 |
DR97_502 | DR97_3077 | DR97_502 | DR97_3077 | annotation not available | annotation not available | 0.442 |
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