DR97_3126 protein (Pseudomonas aeruginosa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

DR97_3126

Uncharacterized protein (126 aa)

Predicted Functional Partners:

DR97_3127

0.974

DR97_3128

0.966

pleD_6

0.937

DR97_2140

0.560

DR97_1182

0.424

DR97_3726

0.419

DR97_1514

0.406

Your Current Organism:

Pseudomonas aeruginosa

NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR97_1182	DR97_3126	DR97_1182	DR97_3126	Conserved hypothetical protein	Uncharacterized protein	0.424
DR97_1182	DR97_3127	DR97_1182	DR97_3127	Conserved hypothetical protein	Uncharacterized protein	0.453
DR97_1514	DR97_3126	DR97_1514	DR97_3126	annotation not available	Uncharacterized protein	0.406
DR97_1514	DR97_3726	DR97_1514	DR97_3726	annotation not available	annotation not available	0.605
DR97_2140	DR97_3126	DR97_2140	DR97_3126	annotation not available	Uncharacterized protein	0.560
DR97_2140	DR97_3127	DR97_2140	DR97_3127	annotation not available	Uncharacterized protein	0.625
DR97_2140	DR97_3128	DR97_2140	DR97_3128	annotation not available	annotation not available	0.504
DR97_3126	DR97_1182	DR97_3126	DR97_1182	Uncharacterized protein	Conserved hypothetical protein	0.424
DR97_3126	DR97_1514	DR97_3126	DR97_1514	Uncharacterized protein	annotation not available	0.406
DR97_3126	DR97_2140	DR97_3126	DR97_2140	Uncharacterized protein	annotation not available	0.560
DR97_3126	DR97_3127	DR97_3126	DR97_3127	Uncharacterized protein	Uncharacterized protein	0.974
DR97_3126	DR97_3128	DR97_3126	DR97_3128	Uncharacterized protein	annotation not available	0.966
DR97_3126	DR97_3726	DR97_3126	DR97_3726	Uncharacterized protein	annotation not available	0.419
DR97_3126	pleD_6	DR97_3126	DR97_3125	Uncharacterized protein	Response regulator PleD; GGDEF- diguanylate cyclase domain protein	0.937
DR97_3127	DR97_1182	DR97_3127	DR97_1182	Uncharacterized protein	Conserved hypothetical protein	0.453
DR97_3127	DR97_2140	DR97_3127	DR97_2140	Uncharacterized protein	annotation not available	0.625
DR97_3127	DR97_3126	DR97_3127	DR97_3126	Uncharacterized protein	Uncharacterized protein	0.974
DR97_3127	DR97_3128	DR97_3127	DR97_3128	Uncharacterized protein	annotation not available	0.981
DR97_3127	DR97_3726	DR97_3127	DR97_3726	Uncharacterized protein	annotation not available	0.407
DR97_3127	pleD_6	DR97_3127	DR97_3125	Uncharacterized protein	Response regulator PleD; GGDEF- diguanylate cyclase domain protein	0.916

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