Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AtsK | DR97_3148 | DR97_3149 | DR97_3148 | annotation not available | annotation not available | 0.935 |
AtsK | DR97_3150 | DR97_3149 | DR97_3150 | annotation not available | annotation not available | 0.948 |
AtsK | DR97_5789 | DR97_3149 | DR97_5789 | annotation not available | annotation not available | 0.491 |
AtsK | DR97_5795 | DR97_3149 | DR97_5795 | annotation not available | annotation not available | 0.750 |
AtsK | DR97_5796 | DR97_3149 | DR97_5796 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.750 |
AtsK | exbB1 | DR97_3149 | DR97_3155 | annotation not available | annotation not available | 0.758 |
AtsK | exbD | DR97_3149 | DR97_3156 | annotation not available | Biopolymer transport exbd/tolr family protein; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates | 0.639 |
AtsK | tonB2 | DR97_3149 | DR97_3154 | annotation not available | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.609 |
DR97_3148 | AtsK | DR97_3148 | DR97_3149 | annotation not available | annotation not available | 0.935 |
DR97_3148 | DR97_3150 | DR97_3148 | DR97_3150 | annotation not available | annotation not available | 0.896 |
DR97_3148 | DR97_5455 | DR97_3148 | DR97_5455 | annotation not available | annotation not available | 0.767 |
DR97_3148 | DR97_5757 | DR97_3148 | DR97_5757 | annotation not available | annotation not available | 0.772 |
DR97_3148 | DR97_5789 | DR97_3148 | DR97_5789 | annotation not available | annotation not available | 0.838 |
DR97_3148 | DR97_5795 | DR97_3148 | DR97_5795 | annotation not available | annotation not available | 0.856 |
DR97_3148 | DR97_5796 | DR97_3148 | DR97_5796 | annotation not available | Rna polymerase sigma factor, sigma-70 family protein; Belongs to the sigma-70 factor family. ECF subfamily | 0.807 |
DR97_3148 | exbB1 | DR97_3148 | DR97_3155 | annotation not available | annotation not available | 0.927 |
DR97_3148 | exbD | DR97_3148 | DR97_3156 | annotation not available | Biopolymer transport exbd/tolr family protein; Involved in the TonB-dependent energy-dependent transport of various receptor-bound substrates | 0.798 |
DR97_3148 | tonB2 | DR97_3148 | DR97_3154 | annotation not available | Hypothetical protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (By similarity) | 0.931 |
DR97_3150 | AtsK | DR97_3150 | DR97_3149 | annotation not available | annotation not available | 0.948 |
DR97_3150 | DR97_3148 | DR97_3150 | DR97_3148 | annotation not available | annotation not available | 0.896 |
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