STRINGSTRING
gltC_6 protein (Pseudomonas aeruginosa) - STRING interaction network
"gltC_6" - annotation not available in Pseudomonas aeruginosa
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gltC_6annotation not available (306 aa)    
Predicted Functional Partners:
DR97_2767
DUF1028 domain-containing protein (224 aa)
 
          0.788
DR97_2769
annotation not available (434 aa)
 
          0.786
yabJ_1
annotation not available (140 aa)
 
          0.784
argE_1
acOrn-deacetyl- acetylornithine deacetylase; Belongs to the peptidase M20A family. ArgE subfamily (384 aa)
 
      0.685
DR97_3177
annotation not available (477 aa)
 
        0.569
puuC1
annotation not available (496 aa)
 
        0.485
DR97_3178
annotation not available (460 aa)
 
        0.459
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (333 aa)
     
      0.435
DR97_3164
annotation not available (297 aa)
 
   
  0.413
gpuR
annotation not available (316 aa)
   
        0.410
Your Current Organism:
Pseudomonas aeruginosa
NCBI taxonomy Id: 287
Other names: ATCC 10145, ATCC 10145-U, Bacillus aeruginosus, Bacillus pyocyaneus, Bacterium aeruginosum, Bacterium pyocyaneum, CCEB 481, CCUG 28447, CCUG 29297, CCUG 551, CFBP 2466, CIP 100720, DSM 50071, IBCS 277, IFO 12689, JCM 5962, Micrococcus pyocyaneus, NBRC 12689, NCCB 76039, NCIB 8295, NCIMB 8295, NCTC 10332, NRRL B-771, P. aeruginosa, Pseudomonas aeruginosa, Pseudomonas polycolor, Pseudomonas pyocyanea, Pseudomonas sp. RV3, RH 815, VKM B-588, bacterium ASFP-37, bacterium ASFP-38, bacterium ASFP-45, bacterium ASFP-46, bacterium ASFP-48
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